Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02158 ATGGAGGACGATTCCAAACCCCATGCACGCATCGATATCAAGTCCTCGCCAGCCAAATTCGCTGCTGAATTGACTGATAGTCTACAAGAATATAAGGTTCCCATTTTCAAACCTGGCTCTCGGAAGCGAGGCGATACCTGGGTCATCTCAGTCTTCGTGCTTTTGCAGATCGGCGTCTTCATCGTCACCATGGTCGTCAATAACTGCTGGGCTAATTCTCACGGTGATTGCGCTCTCAAGCAAATCGGAAGATTGTCATTTCAGCATCTTTCCGAGAATCCCCTTCTCGGCCCTTCCGAATCCACGTTAGTAGAAATGGGAGCTCTCCAACGTACCTTGTTGACAGAATATCGTCAAACTTGGCGTCTTTTTACATCTCCATTTTTGCATGCTGGAGTCATCCACCTTGTCATCAATCTCTGCAGTGTGACCTTTGTGGGAATACAATTAGAGCAGGAGTTTGGAGCATTGAGGATTGGGATAATCTATATACTGTCTGCTTTTATGGGTTCTTTGGTGGCTTCTCTTTATATCCAAAATGTCCCAGCTGTTGGTTCTTCAGGCGCTTTATTTGGATTACTTGGAACATTGCTTTCTGCGCTTCTTTGGAACTGGAAATTTTACACGAATAAGTTTGCAGCTATAGTATCAttgatttttgtctttgtcttcaatttcgcGCTTGGTTTGCTGCCTTACGTGGACAATTTTTCGAGCATTGGAGGTCTTATATCAGGATTCCTTCTTggatttgttcttttatttcgcCCTCAGCAAGTAGCTCCGAATAAAGAAGGTCTCGTTGAGTATGATTTCAAAACTTACATCAAGTCAAAGTTGAAGCAAAAACTGGACAGACCAGTTGTGAGGATTTTCACAGTCATCCTCTTCAGCCTACTATTTGCAGGATGTCTTGTGGCTGTTTTTCATGGAATTAACATCAACCGATATTGTAAACTGTGCCACTATGTTGACTGTATTCCTTTTAAAAGGTGGCACTGCAAAGACATAGAAACTTCTTGTGAGACTATGGTGAGCAATGAACGGTTGACGCTGACTTGTCTCGGGAACGGCAACTTCAGGATCTTTCCCTTTACCAATATTACCCGGGCAAGACAAAATGACTTGTGCAGCTCGATATGCTTAGGAGACTA 1154 0.4185 MEDDSKPHARIDIKSSPAKFAAELTDSLQEYKVPIFKPGSRKRGDTWVISVFVLLQIGVFIVTMVVNNCWANSHGDCALKQIGRLSFQHLSENPLLGPSESTLVEMGALQRTLLTEYRQTWRLFTSPFLHAGVIHLVINLCSVTFVGIQLEQEFGALRIGIIYILSAFMGSLVASLYIQNVPAVGSSGALFGLLGTLLSALLWNWKFYTNKFAAIVSLIFVFVFNFALGLLPYVDNFSSIGGLISGFLLGFVLLFRPQQVAPNKEGLVEYDFKTYIKSKLKQKLDRPVVRIFTVILFSLLFAGCLVAVFHGININRYCKLCHYVDCIPFKRWHCKDIETSCETMVSNERLTLTCLGNGNFRIFPFTNITRARQNDLCSSICLGD 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02158 384 PANTHER RHOMBOID-RELATED 1 381 IPR002610 GO:0004252|GO:0006508|GO:0016021
Bva12g02158 384 PANTHER RHOMBOID-LIKE PROTEIN 8 1 381 - -
Bva12g02158 384 SUPERFAMILY Rhomboid-like 45 258 IPR035952 -
Bva12g02158 384 Pfam Rhomboid family 116 255 IPR022764 GO:0004252|GO:0016021
Bva12g02158 384 Gene3D - 41 256 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02158 Bva-Chr12 16704592 16707364 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02158 - - gmx:100775875 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02158 12 16704592 16707364 Bva12g02158 12 16704592 16707364 ECH