Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02150 ATGGACATGATGGAGTTATGGGCAATATTTGGGCCTGGCGTTGCCGGCGCTGTTTTCGGTGCCGGCTGGTGGATATGGGTTGACGCCGTCGTCTGCAGCTCCGTCAAGGTTTCCTTCCTCCACTACCTCCCTGGGATTTTTGCATCTTTGGCGGCTCTGATGTTCAATTGCGTTAGGAAGGAAGATATTGATTATTCACCTTATGACGAAGGCGAGTGGAGACTGAAGCTGTGGCTCTTCTTCGCTTATGTTGTATCCTTTGTTTCTTTAGCTGCATCAGTGGGTCTATTGATACAAGATTCAATCGATAAATCTGCTCCTTCAGTCTGGACGGGAGCTGCAGGTGTCTTGCAGTGTGTTTTTGTATTGATCAGTGGGCTGACAAGATATGCTGGAAGCTCTGCGAGGCAAACCTTTGCTGCTCTCCCTAGGCACAAGAGACCCCTTACTCAGGACCTAAGCGCAGCCGAGGTCTGGGTCAATACCTACGTCGTTCCATACATAAACGACGTTAATATTGAGCATATAACCGTAGGTAAAGAGGTGATACCAGGGGCAGAAGCACCATTCATAGCTCGGGCCATAAACAATGTCGTAAATGTTCTCAGTGTTGCGTGTGTAGAGAAAGATATCAAGGTGACCGCAGTAGTGGATACATGTGCCCTGGGAGTCTCTTATCCACCTTCATCTGGAGCATGCACTGATGAAGCAGCTCATTCCATGAAAGAGACAGCACCAATTTTGTTACAACATGGTCAACAAACCCCGTGGTGGTTGATAGAGATTACAAGTACTCCAATCTGTTTGATGCATTTCATGCTGCCCTTGAGAAGATTGGTGGTCATTGATGTGTCCGAGACAGGGTGGCCTACTGCGGGCAATGATCCTTACAcaagcaaagagaaaaatttgatgaatcaTGTTTTGGGAGGACAAGGGACACCAAGAAGACCTGGCCAGATTTTCAATACTTTTCTCTTTGAAATGTTCAATCAAGATCTAAAGAGTAGTGGGATTGAGCAGAACTGGGGATTCTTCTATCCCAATATGCTGCcaatttatccattttggccATGTTA 1079 0.4504 MDMMELWAIFGPGVAGAVFGAGWWIWVDAVVCSSVKVSFLHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRLKLWLFFAYVVSFVSLAASVGLLIQDSIDKSAPSVWTGAAGVLQCVFVLISGLTRYAGSSARQTFAALPRHKRPLTQDLSAAEVWVNTYVVPYINDVNIEHITVGKEVIPGAEAPFIARAINNVVNVLSVACVEKDIKVTAVVDTCALGVSYPPSSGACTDEAAHSMKETAPILLQHGQQTPWWLIEITSTPICLMHFMLPLRRLVVIDVSETGWPTAGNDPYTSKEKNLMNHVLGGQGTPRRPGQIFNTFLFEMFNQDLKSSGIEQNWGFFYPNMLPIYPFWPC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02150 359 Gene3D Glycosidases 278 357 - -
Bva12g02150 359 PANTHER SMALL MEMBRANE PROTEIN-RELATED 3 131 IPR007919 -
Bva12g02150 359 Pfam Glycosyl hydrolases family 17 282 354 IPR000490 GO:0004553|GO:0005975
Bva12g02150 359 Pfam Glycosyl hydrolases family 17 129 242 IPR000490 GO:0004553|GO:0005975
Bva12g02150 359 PANTHER OS02G0566900 PROTEIN 3 131 - -
Bva12g02150 359 Pfam Uncharacterised protein family (UPF0220) 13 128 IPR007919 -
Bva12g02150 359 Gene3D Glycosidases 127 262 - -
Bva12g02150 359 SUPERFAMILY (Trans)glycosidases 149 356 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02150 Bva-Chr12 16650305 16655004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02150 143 357 Glycoside Hydrolase AT1G77780 33.591 1.54e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02150 - - mnt:21405765 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02150 12 16650305 16655004 Bva12g02150 12 16650305 16655004 ECH