Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02142 ATGACGTGTGAAGTGCGGGTTGCTCCTCAACCTGCATTCAATAGAAACCTTATTCCTTCGACATTGTTATGTTGGAAGACGATGTGCGTTGAAACTCCAAGGCCGGGCATGGATTCTGATAGCAGAGCCAAGCATAATGCAAAACCACTGAGTGCAGACGCTGAGCCATTCTCGCTCACAAACAACTCATTTCTTCGGTTACCGCACGAGATTTATAGTGGTCAAATAGAAGTGCCATATCCTCAACTAGCACTACCAACAGACATGGTGCCGCCGTTTCCACCTTCCCTGTCACCGCCTCACCAAACAGAACCGGGACTTGTTTGTGTTTATAGTGAAGGACCAGTTATGCTAATCCCAAATTCCATAGAGGCCATGAATGGGTTTGGCCCTTATCAAGCTGCCTATTGGTATCCCAGCAATCCCGGATTCTATAATCATGTCCCCGCATCCTACGATGTGGAAGATATTAATACAAGGGTTTCCAATAGAAGGATGGGTAGAACTAGAATTACAACGTCATCAGTAGCCCCTTCAACATCGCCTCAATGGAGGGTCAAggcaagaaacaaaaacacagTTCATCAAACTAGCAAAAGCGGTGGTGGTACTAGTACTAGAGCTATTGACCGTCCTCTTATACCGTTTCCTTCAACCCTTGAGGAAGCTGAAAGCTCCGAAACAACTACtgtaatgattaaaaatatccCATACCATTATCGGTTCAAGGATTTGCTACAGATAGTGGACTATTATTGCCGGAAGGAGAACCGCCAGTGCGCTGATCCTTCCCGTTGGGCCAAATatgatttcatttatttgccCATGGACTACATTATACACGCCCGTGACTCAAAGCTATCAAATCTTGGGTACGCGTTCGTGAATTTTACAACAACTGTAGCTGCCTTCAAGTTCTACGAGCAATTCCATGGATACAAGTGGGACGAGGGCAGGAGAAGGAAACCGTGTGAGATAACTTGTGCCAAACTACAGGGAAAAGAGATGTTGAAAAATAGATTTGAGCGGAAAATTTTCAAGAGCAAATGCCCTAGTTTCCGTCCGGTTGAGTATTCACCTGCCCGGGATGGTTTCAATGTGGGAATCAGAGGAAAACCAGTGGGGAAGTACGTGGAGGGTTTGCCCAGACGAGACAGCAGCTG 1163 0.4437 MTCEVRVAPQPAFNRNLIPSTLLCWKTMCVETPRPGMDSDSRAKHNAKPLSADAEPFSLTNNSFLRLPHEIYSGQIEVPYPQLALPTDMVPPFPPSLSPPHQTEPGLVCVYSEGPVMLIPNSIEAMNGFGPYQAAYWYPSNPGFYNHVPASYDVEDINTRVSNRRMGRTRITTSSVAPSTSPQWRVKARNKNTVHQTSKSGGGTSTRAIDRPLIPFPSTLEEAESSETTTVMIKNIPYHYRFKDLLQIVDYYCRKENRQCADPSRWAKYDFIYLPMDYIIHARDSKLSNLGYAFVNFTTTVAAFKFYEQFHGYKWDEGRRRKPCEITCAKLQGKEMLKNRFERKIFKSKCPSFRPVEYSPARDGFNVGIRGKPVGKYVEGLPRRDSS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02142 387 MobiDBLite consensus disorder prediction 172 205 - -
Bva12g02142 387 Pfam RNA recognition motif 2 229 341 IPR007201 -
Bva12g02142 387 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 159 367 - -
Bva12g02142 387 Gene3D - 218 338 IPR012677 -
Bva12g02142 387 PANTHER RNA BINDING PROTEIN 159 367 - -
Bva12g02142 387 MobiDBLite consensus disorder prediction 172 207 - -
Bva12g02142 387 SUPERFAMILY RNA-binding domain, RBD 195 317 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02142 Bva-Chr12 16608499 16610148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02142 - - aprc:113874333 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02142 12 16608499 16610148 Bva12g02142 12 16608499 16610148 ECH