LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva12g02140	ATGCATCCATTTTGCTGTGTTTCCGCCATTTCCGACCAGTCTTCCCCAGTCAAACCCTCGCCTAATCCGTTCGGGGACTTCAGTATGCCTCCTCTCCCCGCCGCCACTGCTACTGCCAATAGATCCGATTCCGTTAACCGAACCACCAACCACATCCACCACAACAGTAGTCACAGCAATTACAGCAACAACTCTAATAATAATTGTGAGTACGGAAGGCTGAGTCAGCGGGAGCAGCAACCATTGGCGGTGGACGTGAAGATCAATGAATTGGTTGGAAATGGAATCTCGGGGATACTGTACAAGTGGGTAAATTACGGCAAAGGCTGGAGACCGAGGTGGTTTGTACTTCAAGATGGCGTGCTATCGTACTATAAGATTCACGGACCCGATAAGATCATCGTCAATCAGGAAACCGAGAAGGGTTCAATGGTTATTGGCGAAGTATCCATGCGAAGGATCTCTCGCAACAAGAATTTTCATTCCTATCACCAGCACTTACACCATCAACGAAAGCCATTTGGCGAAATTCATCTGAAGGTTTCATCCATTCGGGAAAGCAAATCCGATGATAAGCGCTTTTCTATATTCACTGGAACAAAGAGACTCCACTTGAGGGCTGAGACACGTGAAGATCGAGTGGCATGGATGGAGGCGTTGCAGGCGGTAAAAGATATGTTCCCCCGGATGTCCAACAGTGAGCTGATGGCTCCATTGGACAATGTAGCCATATCAACTGAGAAACTGAGGCAGCGGCTTCTGGAAGAAGGTGTTAGCGAGGCAGCCATTCAGGATAGCGAGCAAATTATGCGATGCGAGTTTGCAGCATTACAAAACCAGCTTGTGCTGCTTAAGCAGAAGCAGTTGATCCTGATGGACACACTACGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACAGTTGTTGACGAGAGCCAAAGACAGTTAAATGATCAAGGGGCTTCCTCTCGATTAAGGCAGGACAAATTCAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAACGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGATGATGACAATGCCTTTTTTGACACTCGTGACTTTCTCTCATCCAGTTCTTTTAAAAGTAATGGATCTGATTATAGGGTATCATCTTTCTCTTCAGATGATGAAGGTCTCTATGTAGTTGAATCAGAGGAGGAAGTGGATCCTTCAATTAGATCCGTTGGAACCAACTATCCTTATGTTAAGCGGCGTAAGAAATTGCCTGACCCtgttgagaaagagaaaggcgTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAAGATCTAACAAGAGTATGCCTTCCGGTTTACTTTAATGAGCCTGTTTCCTCTCTGCAAAAATGTTTCGAAGAAATGGAGTATTCATATCTCCTGGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGTCTCATGAGAATTCTCAACGTGGCTGCTTTTGCTGTATCTGGCTATGCTTCAACCGAAGGAAGAATTTGCAAGCCATTTAATCCATTATTAGGGGAAACATATGAAGCTGATTATCCTGATAAAGGCCTCCGGTTTTTCTCAGAGAAGGTTAGCCACCACCCAATGATCGTGGCATGTCACTGCGATGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTGGGTATTTTAACTTTGGAATTTGATGATGGAGAAATTTTCCAGTGGAGTAAGGTTACAACATCAATATACAATCTCATACTGGGAAAGCTGTATTGTGACCACTATGGTACAATGCGTATACAGGGAAACCGTGAATACTCGTGTAAACTGAAATTCAAGGAACAATCTATAATTGATCGAAATCCACACCAGGTACATGGCATTGTCCAAGATAGGAATGGAAAAACAGTGGCTACTTTATTTGGAAAATGGGATGAAAGCATGTATTTTGTTAACGGAGATTGTGCTGGGAAAGGCAAAGGTCACGACTCTTTGTCAGATGCCCGTCTACTCTGGAAACGGAGCAAGCCTCCCAAGTTTCCAACTAGATATAACTTTACTCGATTTGCCATCACATTAAATGAACTTACCCCTGGATTAAAGGAAAAGTTGCCACCTACAGATTCCAGGTTAAGACCAGACCAAAGGTATTTAGAAAATGGGGAGTATGAGATGGCAAACGCAGAGAAATTACGGCTAGAGCAGCGGCAACGCCAGGCTCGGAAGATGCAAGAGAGTGGATGGAAACCACGGTGGTTTGCGAGGGATAAAGCTAGTGGTACATGCCGTTATTTAGGAGGGTATTGGGAAGCCAGGCAACGAGGAAACTGGGACTCATGCCCTGACATCTTCGGCCAAATCCCTTCTGATCATCTTTCTGACTG	2423	0.442	MHPFCCVSAISDQSSPVKPSPNPFGDFSMPPLPAATATANRSDSVNRTTNHIHHNSSHSNYSNNSNNNCEYGRLSQREQQPLAVDVKINELVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVNQETEKGSMVIGEVSMRRISRNKNFHSYHQHLHHQRKPFGEIHLKVSSIRESKSDDKRFSIFTGTKRLHLRAETREDRVAWMEALQAVKDMFPRMSNSELMAPLDNVAISTEKLRQRLLEEGVSEAAIQDSEQIMRCEFAALQNQLVLLKQKQLILMDTLRQLETEKVDLENTVVDESQRQLNDQGASSRLRQDKFSEGSASESEDDNERNDAAEEETDDDDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDEGLYVVESEEEVDPSIRSVGTNYPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTRVCLPVYFNEPVSSLQKCFEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCDGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEIFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESMYFVNGDCAGKGKGHDSLSDARLLWKRSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANAEKLRLEQRQRQARKMQESGWKPRWFARDKASGTCRYLGGYWEARQRGNWDSCPDIFGQIPSDHLSD	807

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva12g02140	807	MobiDBLite	consensus disorder prediction	314	360	-	-
	Bva12g02140	807	Gene3D	-	728	789	-	-
	Bva12g02140	807	SMART	PH_update	94	227	IPR001849	-
	Bva12g02140	807	Gene3D	-	517	689	-	-
	Bva12g02140	807	Coils	Coil	295	315	-	-
	Bva12g02140	807	SUPERFAMILY	Oxysterol-binding protein-like	426	803	IPR037239	-
	Bva12g02140	807	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	3	801	IPR000648	GO:0008289
	Bva12g02140	807	Coils	Coil	736	756	-	-
	Bva12g02140	807	MobiDBLite	consensus disorder prediction	314	330	-	-
	Bva12g02140	807	Pfam	Pleckstrin homology domain	101	221	-	-
	Bva12g02140	807	MobiDBLite	consensus disorder prediction	11	71	-	-
	Bva12g02140	807	PANTHER	OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C	3	801	-	-
	Bva12g02140	807	MobiDBLite	consensus disorder prediction	343	359	-	-
	Bva12g02140	807	MobiDBLite	consensus disorder prediction	35	71	-	-
	Bva12g02140	807	CDD	PH_ORP_plant	96	232	-	-
	Bva12g02140	807	Pfam	Oxysterol-binding protein	431	785	IPR000648	GO:0008289
	Bva12g02140	807	Gene3D	-	94	227	IPR011993	-
	Bva12g02140	807	SUPERFAMILY	PH domain-like	96	231	-	-
	Bva12g02140	807	ProSiteProfiles	PH domain profile.	93	225	IPR001849	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva12g02140	Bva-Chr12	16580690	16586834	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva12g02140	K20456		-	gmx:100137077	1336.24

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva12g02140	12	16580690	16586834	Bva12g02140	12	16580690	16586834	ECH