Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02134 ATGGCGGGTGGTGGAAAGGTCTCCTTCAAAGTTACCCTCACCTCTGATCCCAAGCTACCCTTCAAAGTGTTCAGCGTTCCTGAGGCTGCTCCTTTCACAGCCGTTCTCAAATTTGCAGCTGAAGAATTCAAAGTGCCTCCCCAAACTAGCGCTATTATCACTAAcgATGGTGTTGGGATCAATCCTCAGCAGAGTGCTGGTAATGTCTTTCTTAAGCATGGTTCAGAGTTGCGCTTGATTCCGCGCGATAGGGTTGGTGCGACTTGCTTGGAATCTGAGTGGAAGAGGTTCCATCTTGGCTCCCTCTTCCCCgtagcaaaagaaagaagaaaccaaaTCTTGGAACTTTCTTGCTTCTG 359 0.4568 MAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGATCLESEWKRFHLGSLFPVAKERRNQILELSCF 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02134 119 Pfam Ubiquitin fold modifier 1 protein 6 80 IPR005375 GO:0071569
Bva12g02134 119 Gene3D - 4 87 - -
Bva12g02134 119 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 89 IPR005375 GO:0071569
Bva12g02134 119 SUPERFAMILY Ubiquitin-like 2 86 IPR029071 -
Bva12g02134 119 CDD Ubl_UFM1 7 81 - -
Bva12g02134 119 PANTHER UBIQUITIN-FOLD MODIFIER 1 3 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02134 Bva-Chr12 16539079 16543102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02134 K12162 - zju:107421011 174.866
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02134 12 16539079 16543102 Bva12g02134 12 16539079 16543102 ECH