Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02133 ATGGGTCAGCAGACAcattttgaacttttgaagCTTCCTCTGAATTCGAAAACAGAAACCTCAAGCTACCTATGGCGTCTGGTGGATGGAGGACCCAAAACTAGTGAGTCTGCCAGAGTTTTCACAATAGTAAACAACTGCAAGGAGACACTGTGGCCAGCAGCGACCCCTGGAGACAACTTCAATGGTGGAGGGTTCGTTTTGAAACCTGGCCAATCTATGGTATTCACAGCTCCAGTGGCTTGGAGTGGAAGGATCTGGGCTAGAACTGGCtgcaaatttgataaaaatggcAATGGTTCGTGCCAAACTGGTGCCTGTGGGACCAGTTTGAAATGCTCAGCTTCAGGAAATCCCCCTGCTTCACTAGCAGAATTTACGCTTGCAGCTTTGGACTTCTATGATGTTAGCCTTGTGGATGGATTCAATGTGCCAATAGTTCTCAAACCCGTGAATGGCAAGGGAAATTGCAGCATTGCCGGGTGTGACAGTGATCTCAGACCCAAATGCCCAAACGAACTTGCTGTCAAGGCCAATGGAAAGACCATTGCCTGCAGAAGTGCCTGCGATGTGTTCAATGCCGATGAATATTGCTGCAGAGGAGTCTATGGGAATCCTTCCACGTGCAAAGCTACATATTACTCCAATAAGTTTAAGCAGGCATGCCCAAAATCATATAGCTATGCCTATGATGATCCAACTAGCATTTTCACTTGCTCTGGAGCAGATTATATCATAGCCTTCTGCTCTTCCAGGAAGCAGCCATTGTGCACTTACCATAACAATAAGCTTCACTGCAGTGGATCAAGAGGCTTCAGTTCATTGATTGCAAGCTGGTTGATCATAGTGCTCGTGGCTTTTTCGATGCTTAGCTA 875 0.4503 MGQQTHFELLKLPLNSKTETSSYLWRLVDGGPKTSESARVFTIVNNCKETLWPAATPGDNFNGGGFVLKPGQSMVFTAPVAWSGRIWARTGCKFDKNGNGSCQTGACGTSLKCSASGNPPASLAEFTLAALDFYDVSLVDGFNVPIVLKPVNGKGNCSIAGCDSDLRPKCPNELAVKANGKTIACRSACDVFNADEYCCRGVYGNPSTCKATYYSNKFKQACPKSYSYAYDDPTSIFTCSGADYIIAFCSSRKQPLCTYHNNKLHCSGSRGFSSLIASWLIIVLVAFSMLS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02133 291 CDD TLP-PA 40 249 - -
Bva12g02133 291 Pfam Thaumatin family 45 249 IPR001938 -
Bva12g02133 291 ProSiteProfiles Thaumatin family profile. 38 249 IPR001938 -
Bva12g02133 291 PANTHER OS03G0233200 PROTEIN 24 262 IPR001938 -
Bva12g02133 291 Gene3D Thaumatin 40 249 IPR037176 -
Bva12g02133 291 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 24 262 - -
Bva12g02133 291 SMART tha2 41 250 IPR001938 -
Bva12g02133 291 PIRSF PR5 12 290 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 132 148 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 85 96 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 64 73 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 40 52 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 98 127 IPR001938 -
Bva12g02133 291 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Bva12g02133 291 SUPERFAMILY Osmotin, thaumatin-like protein 40 250 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02133 Bva-Chr12 16536851 16538429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02133 38 255 Receptor kinase-like Gene Family AT5G38280 45.339 1.56e-54 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02133 - - gmx:100813659 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02133 12 16536851 16538429 Bva12g02133 12 16536851 16538429 ECH