Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02128 ATGACATGGGCGAGGAGAAAAATAAGTAGAATTCTGGACTATAAAATGTCTAAATTGATGAGGGAAGACGAGACAGTGCAAAACGTAGCTAATTCCTTGTCCCAAGGAACTATCCCAGATGAGTTCGTTAGGTCAGAGAAAGAGCAACCAGGCATCACAACCGTTCAAGGTGTGCAACTTCAGGTTCCCACCATTGATTTTAGTAACCAAGATGACCAGACAATGCAGCGCCAGATTCTGGAGGCAAGTAGGGATTGGGGGATGTTCCAAATTGTCAACCATGAGATACCTTCCGATCTTATACGCGAATTGCAGCGTGTGGGTAAAGAGTTCTTTGAATTGCCACAAGAGGAAAAGGATTTGTATGCCAAGTCTCCTGACTCTACGTCTATAGAGGGCTATGGAACCAAGCTTCAGAAGGAAGTGGACGGCAAGAAAGGTTGGGTCGACCATTTGTTCCATAGGATATGGCCACCTTCTGCCATTGACTATGAGTTTTGGCCTAAGAACCCTACCACTTACagGGAGATTAACCAGGAATACGCAAAGCGCATGCATGGAGTGGTAGACAAACTGTTCAAGAGTATGTCAATAGGGTTAGGGCTTGATGCAGATGAGCTAAAAAAGTCTTCGGGTGGTGATGAGTTGGTTTATCTTATGAAGATAAACTACTACCCACCTTGCCCGCGCCCTGATCTGGCCCTTGGGGTGGTGGCTCACACTGACATGAGCTTCATAACCATTCTTGTGCCCAACCAGGTCCCTGGCCTTCAGGCTTTCAGAGATGGCCATTGGTACGACGTCAAGTATATCCCAAATGCCCTCGTCATACATATTGGTGACCAAATGGAgATAGTGAGCAATGGAAAATACAAGAGCGTGTTGCACAGGACAACAGTGAGCAAAGACGAGACAAGAATGTCATGGCCAGTGTTCTTAGAGCCTCCATCAGAGCTCGAAGTTGGCCCTCATCCAAAGCTGGTTACCGCAGACAGCCCAGCAAAATACAAGacgaaaaaattcaaagactACGTTTATTGTAAGCTCAACAAGATCCCTCAGTA 1064 0.4549 MTWARRKISRILDYKMSKLMREDETVQNVANSLSQGTIPDEFVRSEKEQPGITTVQGVQLQVPTIDFSNQDDQTMQRQILEASRDWGMFQIVNHEIPSDLIRELQRVGKEFFELPQEEKDLYAKSPDSTSIEGYGTKLQKEVDGKKGWVDHLFHRIWPPSAIDYEFWPKNPTTYREINQEYAKRMHGVVDKLFKSMSIGLGLDADELKKSSGGDELVYLMKINYYPPCPRPDLALGVVAHTDMSFITILVPNQVPGLQAFRDGHWYDVKYIPNALVIHIGDQMEIVSNGKYKSVLHRTTVSKDETRMSWPVFLEPPSELEVGPHPKLVTADSPAKYKTKKFKDYVYCKLNKIPQ 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02128 354 Pfam 2OG-Fe(II) oxygenase superfamily 220 315 IPR044861 -
Bva12g02128 354 SUPERFAMILY Clavaminate synthase-like 33 352 - -
Bva12g02128 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 168 IPR026992 -
Bva12g02128 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 216 315 IPR005123 -
Bva12g02128 354 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 31 351 - -
Bva12g02128 354 Gene3D - 22 352 IPR027443 -
Bva12g02128 354 PRINTS Isopenicillin N synthase signature 275 301 - -
Bva12g02128 354 PRINTS Isopenicillin N synthase signature 79 96 - -
Bva12g02128 354 PRINTS Isopenicillin N synthase signature 240 261 - -
Bva12g02128 354 PANTHER OS02G0767300 PROTEIN 31 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02128 Bva-Chr12 16513750 16515693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02128 60 344 Glycosyltransferase AT5G59530 31.561 5.04e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02128 K05278 - jre:108991214 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02128 12 16513750 16515693 Bva12g02128 12 16513750 16515693 ECH