Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02119 ATGCTATTGAGTCGATCCTCATTCCCAACCTTGTCAAAGGATTTCCAGAGGGTCATCGCCGCCAATACAACACAAAAATTCCCGACCTTCCTCGCTTCCATGTCCACCCTTCCCGCTCAGAAGGACCCTGTTTCCAATCAGGATGAGGTCACCCTCAAGACCCCTCAACCTCTCCAGgtCGCAAAGCGCCTGGAGAAGTTTAAAACTACAATCTTCACCCAAATGAGTACGTTGGCGATTAAACATGGAGCCATAAACCTCGGTCAGGGCTTTCCCAACTTTGATGGTCCCGATTTTGTGAAGGAAGCAGCAATTCAGGCCATTAGGGATGGGAAAAATCAGTATGCCCGAGGGTGCGGAGTTCCAGACCTGAACTTTGCCATTGCTGATAGATTTAAGAAAGATACTGGACTTGCAGTGGACCCTGAAAAGGAAGTTACTGTTACTAGTGGGTGCACAGAAGCAATTGCTGCAACTATGTTGGGACTAATAAATCCTGGTGATGAGGTTATCCTGTTTGCTCCTTTTTATGATTCTTACGAAGCCACTCTATCCATGGCTggtgcaaaaataaaaggcatCACTTTGCGGCCTCCTGATTTTGCTGTTCCCATTGATGAACTGAAGTCCACCATCTCAAAGAATACCCGAGCTATTATCATAAATACTCCTCATAACCCAACTGGAAAGATGGTCACTCGAGAGGAGCTTAATGCTATTGCCTCTCTTTGCATTGAGAATGACGTTCTAGTTTTCTCTGATGAAGTTTATGACAAGTTGTCTTTTGATATGGATCACATTTCAATTGCTTCTCTGCCTGGAATGTTTGAGAGGACTGTTACGATGAATTCCTTGGGGAAGACATTTTCCTTAACAGGATGGAAGATTGGGTGGGCAATAGCACCCCCACACTTGACATGGGGACTGCGACAAGCACACTCTTTCCTCACATTTGCCACCTCTACTCCTATGCAGTGGGCAACTGCAGCAGCTCTTAGAGCTCCAGATTCTTACTTTGCGGAGCTAAAGAGGGACTACATGGCAAAAAGGGCTATTTTGGTGGAAGGACTGAAGGCTGTTGGTTTCAAGGTATTTCCATCCAGCGGAACCTACTTTGTGGTTGTAGATCACACACCATTTGGGCTGGAAAATGATGTTGCATTTTGTGAGTATCTAATCAAGGAGGTGGGAGTTGTGGCAATTCCTACcagtgtattttatttaaatccaGAAGAGGGAAAGAATCTAGTTAGATTCACTTTCTGCAAGGACGAGGGAACTCTAAGGGCTGCAGTTGAGAGGATGAAGGAGAAGCTGATAGGAGAAGCTGAAAGAAAATG 1340 0.4425 MLLSRSSFPTLSKDFQRVIAANTTQKFPTFLASMSTLPAQKDPVSNQDEVTLKTPQPLQVAKRLEKFKTTIFTQMSTLAIKHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGCGVPDLNFAIADRFKKDTGLAVDPEKEVTVTSGCTEAIAATMLGLINPGDEVILFAPFYDSYEATLSMAGAKIKGITLRPPDFAVPIDELKSTISKNTRAIIINTPHNPTGKMVTREELNAIASLCIENDVLVFSDEVYDKLSFDMDHISIASLPGMFERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGLRQAHSFLTFATSTPMQWATAAALRAPDSYFAELKRDYMAKRAILVEGLKAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEGTLRAAVERMKEKLIGEAERK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02119 446 Pfam Aminotransferase class I and II 85 434 IPR004839 GO:0009058|GO:0030170
Bva12g02119 446 Gene3D - 97 335 IPR015421 GO:0003824
Bva12g02119 446 SUPERFAMILY PLP-dependent transferases 60 437 IPR015424 -
Bva12g02119 446 PANTHER FI04487P 60 439 - -
Bva12g02119 446 PANTHER FI04487P 60 439 - -
Bva12g02119 446 Gene3D Aspartate Aminotransferase, domain 1 74 435 IPR015422 GO:0003824
Bva12g02119 446 CDD AAT_like 85 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02119 Bva-Chr12 16477158 16480601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02119 K23977 - csin:114279044 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02119 12 16477158 16480601 Bva12g02119 12 16477158 16480601 ECH