Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02114 ATGGCCCGCCCTCTCTGCTGGCGCTTCTTACTCATTCATCTGACACTAATCCTGTCAACATCTCTCCTCTTTGCGACCGAATCCCatgaagaacaagaacaagacACTCCCATCACTCGCTTCCAGAGCTACCTGAGAATCAAAACAGCTCACCCAGAACCCGATTATTCTTCAGCCGTCTCTTTCCTGAAATCCCTGGCACACTCTATTGGAATTCAATCTCAAACTTTAGAATTTTCACCAGGAAAGCCTGTACTCCTCCTCACATGGCCTGGTTCCAATCCTTCACTCCCTTCACTTCTCTTTAATTCCCACCTCGATTCCGTTCCTGCCGAGCCCTCCAAGTGGGTCCACCCCCCATTCTCTGCTGTACGAACCTCTGACGGCAAAATCTTTGCCCGTGGGGCCCAGGACGACAAATGTATTGCTATGCAATACCTAGAAGCAATTCGGAATCTAAAACAGAAGAAATTCGTTCCTACGCGTACAATTCATATTTCCTATGTGCCGGACGAGGAGATTGGTGGCGTTGATGGGGCTGCCAAGTTTGCGGCTTCGAAAGAGTTCAGGGATTTGAATGTTGGGTTTGTGTTGGATGAAGGGCAGGCTTCCCCTGGTGATGAATTTAGAGTTTTCTATGCGGATAGGATTCCATGGCATATGAAAATCAAGGCAAAGGGACAGCCTGGACATGGGTCGAGGATGTATGATAATAGTGCAATGGAGAATTTGATGAAGAGTTGTGAGCTTGTGAGTAGGTTTAGGGAAAGTCATTTTGATGTGGTGAAGGCGGGTATAGCAGCTAATTCCGaagttatttcaattaatcCCGTTTATGTTAAAGCTGGGGTTCCTTCCCCAACTGGATTTGTCATGAATGTGCAACCTTCTGAGGCAGAAGCCGGTTTCGATCTTAGATTGACGCCTACAACGGACCCTGATGAACTGAAAAGAAGAATTGCAGAAGAATGGGCACCAGCTACTAGAAATATGTCATACGAGATAAAAGAGACTGGACCCATTAGAGACAATATGGGGCGCCCTTTAATGACAGCAACTAATGATTCCAATCCATGGTGGTTAGTTTTCAAGCAGGCTATCACATCTGCCGGAGAAAAACTTGCCAAGCCtgaaattctttcttcaacgACAGATGCTCGGTACATGAGACAAACTGGTGTTCCTGTACTTGGTTTCTCACCCATGAAAAATACGCCCATCTTACTTCATGACCATAACGAGCACCTGCAAGACACTGTGTACATGAGTGGAATAAAGGTATATGAATCCGTGATAAGTTCCCTGAGCTCGTTCACAGAAGCATCAGATTA 1331 0.4463 MARPLCWRFLLIHLTLILSTSLLFATESHEEQEQDTPITRFQSYLRIKTAHPEPDYSSAVSFLKSLAHSIGIQSQTLEFSPGKPVLLLTWPGSNPSLPSLLFNSHLDSVPAEPSKWVHPPFSAVRTSDGKIFARGAQDDKCIAMQYLEAIRNLKQKKFVPTRTIHISYVPDEEIGGVDGAAKFAASKEFRDLNVGFVLDEGQASPGDEFRVFYADRIPWHMKIKAKGQPGHGSRMYDNSAMENLMKSCELVSRFRESHFDVVKAGIAANSEVISINPVYVKAGVPSPTGFVMNVQPSEAEAGFDLRLTPTTDPDELKRRIAEEWAPATRNMSYEIKETGPIRDNMGRPLMTATNDSNPWWLVFKQAITSAGEKLAKPEILSSTTDARYMRQTGVPVLGFSPMKNTPILLHDHNEHLQDTVYMSGIKVYESVISSLSSFTEASD 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02114 443 Gene3D - 221 331 - -
Bva12g02114 443 TIGRFAM Ac-peptdase-euk: N-acyl-L-amino-acid amidohydrolase 29 438 IPR010159 GO:0004046|GO:0005737|GO:0006520
Bva12g02114 443 PIRSF ACY-1 27 440 - -
Bva12g02114 443 Gene3D Zn peptidases 27 220 - -
Bva12g02114 443 PANTHER PUTATIVE-RELATED 19 441 - -
Bva12g02114 443 Pfam Peptidase family M20/M25/M40 101 433 IPR002933 GO:0016787
Bva12g02114 443 SUPERFAMILY Zn-dependent exopeptidases 30 436 - -
Bva12g02114 443 Gene3D - 357 438 - -
Bva12g02114 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 220 335 IPR036264 -
Bva12g02114 443 PANTHER AMINOACYLASE-1 19 441 - -
Bva12g02114 443 Pfam Peptidase dimerisation domain 219 323 IPR011650 -
Bva12g02114 443 CDD M20_AcylaseI_like 35 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02114 Bva-Chr12 16448288 16451391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02114 K14677 - gmx:100817383 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02114 12 16448288 16451391 Bva12g02114 12 16448288 16451391 ECH