Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02113 ATGCTAACCAATTGTCTGCTACCTCGAGCAGATGCCGTGTTGTTTTCCGTTCCTACCTCTGGAACAAAGTGTGTATCCGAGGAAATCCAAAATCACATCGTCGTTTTAGCAGATTACTACGTTGTCGCCGATGAAGCTGTTCAGGCCGCCCACCAAATTCCTACTATTTCTGTTCGGGTGACATCTCCTTACGGAAATAATCTTCACCACAATGAAAATGTTACCCACGGTCAGTTTGCATTTACAACCACTGAGACTGGAAACTACTTGGCGTGCTTCTGGGTAGATACTAGTAAACACGTAGAAGGTGCTGGCCCAACTGTGAGCCTTGATTGGAGAACTGGAATTGCTGCCAAGGATTGGGATACAGTagcaaggaaagaaaagattgagGGTGTTGAACTTGAACTGAGGAAACTTGAAGGAGCTGTAGAAGCCATCCATGAGAACTTGATTTATTTGAAGAATAGGGAAGCAGAAATGAGGGAGGTGAGTGAAACAACAAATGCTAGAGTGGCATGGTTCGGCATCATGTCTCTTGGTGTCTGCATTATGGTTTCGGTGACGCAGCTGTGCTATCTAAAACGCTACTTCCGGAAGAAGAAGCTCATATA 614 0.4365 MLTNCLLPRADAVLFSVPTSGTKCVSEEIQNHIVVLADYYVVADEAVQAAHQIPTISVRVTSPYGNNLHHNENVTHGQFAFTTTETGNYLACFWVDTSKHVEGAGPTVSLDWRTGIAAKDWDTVARKEKIEGVELELRKLEGAVEAIHENLIYLKNREAEMREVSETTNARVAWFGIMSLGVCIMVSVTQLCYLKRYFRKKKLI 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02113 204 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 204 IPR015720 -
Bva12g02113 204 SMART EMP24_GP25L_2 12 199 IPR009038 -
Bva12g02113 204 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 4 204 - -
Bva12g02113 204 Coils Coil 130 150 - -
Bva12g02113 204 Pfam emp24/gp25L/p24 family/GOLD 14 199 IPR009038 -
Bva12g02113 204 ProSiteProfiles GOLD domain profile. 22 139 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02113 Bva-Chr12 16446623 16448164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02113 K20352 - gmx:100820037 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02113 12 16446623 16448164 Bva12g02113 12 16446623 16448164 ECH