Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02108 ATGGCGATGTGGGTATTTGGGTATGGTTCTCTGATTTGGAAAACCGGGTTTAACTATGATGATCGTGTTGTTGGCTTCATCAAAGGCTATCGCCGTGTATTCCATCAAgGCAGTACTGACCACAGAGGGACCCCTGAATACCCAGGAAGAACAGTTACGCTAGAGCCTGCTCAAGAAGAATTATGCTGGGGAGTTGCTTACAAGATCTCGAAGAAGGAAGATCAAGAAGTTGCGTTAACGTATCTAGAAGTGAGGGAAAAGCAATACGACCAGAAAGCCTACCTGGATTTTTTCACTGAGCTAGCAGCTACAACTCCTTCTATTTCCAGAGTGATGGTATACATAGGATCTTCAGACAAAACAGTCAACGAAAATTACTTGGGTGCTGCTCCTGTTGAAGAGATTGCGAGGCAAATAATTCATGCTGAAGGTCCCTCAGGACCCAATAGAGACTATCTTTTCCAACTTGAAAAAGCTCTACTTCAGATAGgatGTGAAGATAAACATGTTATGGATATTGCAAATGAAGTCAGGCGTATTCTTTCGGAAAAGAACTG 557 0.4255 MAMWVFGYGSLIWKTGFNYDDRVVGFIKGYRRVFHQGSTDHRGTPEYPGRTVTLEPAQEELCWGVAYKISKKEDQEVALTYLEVREKQYDQKAYLDFFTELAATTPSISRVMVYIGSSDKTVNENYLGAAPVEEIARQIIHAEGPSGPNRDYLFQLEKALLQIGCEDKHVMDIANEVRRILSEKN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02108 185 Pfam ChaC-like protein 3 179 IPR006840 GO:0003839|GO:0006751
Bva12g02108 185 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 2 184 IPR006840 GO:0003839|GO:0006751
Bva12g02108 185 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 90 IPR036568 -
Bva12g02108 185 Gene3D - 1 181 - -
Bva12g02108 185 CDD GGCT_like 5 116 IPR013024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02108 Bva-Chr12 16413427 16416803 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02108 K22596 - pop:7469146 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02108 12 16413427 16416803 Bva12g02108 12 16413427 16416803 ECH