Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02096 ATGGCTCAAACCATGTTTCTCACGTCTAGCTTCTCCACCAGCCACTCTCTGAATTTCAAGAGAGACTCCTCGCTCCATTTACAGAGTCAAAGACTAAGGCCTAAGTTCTCTAAAATCCCTTTCAACCCGCTTCCTTCAActtcttttacctttttttcttcatcgCGTCCATTTACAACTCTAGCTCTCTTTAAATCAAAAACCAAAGCCACTCCCAAGAAGGTTACAAAGCCAAAGCCAAAGGTTGAAGATGGTATCTTTGGCACCTCTGGTGGATTTGGTTTCACTAAGGAGAACGAGCTGTTCGTGGGTCGTGTTGCTATGATCGGTTTTGCCGCATCATTGTTGGGTGAAGGCATCACAGGGAAAGGGATTCTAGCCCAGTTGAATCTGGAAACTGGAGTTCCCATTTATGAAGCAGagcctcttcttcttttcttcatcctttTCACTCTACTTGGAGCCATTGGAGCTTTAGGTGACCGTGGTCAATTTGTTGATGACCCTCCCACTGGAGTCGAAGGGGCAGTCATTCCACCAGGCAAAGGATTCAGATCAGCTCTGGGTCTCCAAGAAGGAGGTCCTTTATTCGGATTCACCAAAGCAAATGAGCTATTCGTTGGAAGATTGGCTCAAATGGGTTTCGCTTTCTCCTTGATTGGAGAAATTATCACAGGGAAAGGAGCTTTAGCTCAACTGAACATTGAAACAGGGGTGCCCATTAACGAAATTGAACCACTTGTATTGTTCAATgtcttgttcttcttcattGCAGCTTTGAATCCTGGAACTGGTAAATTTGTTACTGACGTCGATGAAGAAGATTA 827 0.4123 MAQTMFLTSSFSTSHSLNFKRDSSLHLQSQRLRPKFSKIPFNPLPSTSFTFFSSSRPFTTLALFKSKTKATPKKVTKPKPKVEDGIFGTSGGFGFTKENELFVGRVAMIGFAASLLGEGITGKGILAQLNLETGVPIYEAEPLLLFFILFTLLGAIGALGDRGQFVDDPPTGVEGAVIPPGKGFRSALGLQEGGPLFGFTKANELFVGRLAQMGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVLFFFIAALNPGTGKFVTDVDEED 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02096 275 Gene3D Chlorophyll a/b binding protein domain 39 137 - -
Bva12g02096 275 PANTHER PHOTOSYSTEM II SUBUNIT S 1 187 - -
Bva12g02096 275 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 197 260 - -
Bva12g02096 275 Pfam Chlorophyll A-B binding protein 91 219 IPR022796 -
Bva12g02096 275 SUPERFAMILY Chlorophyll a-b binding protein 81 253 - -
Bva12g02096 275 Gene3D Chlorophyll a/b binding protein domain 138 245 - -
Bva12g02096 275 PANTHER PHOTOSYSTEM II SUBUNIT S 197 260 - -
Bva12g02096 275 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02096 Bva-Chr12 16352568 16354097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02096 K03542 - rcu:8274074 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02096 12 16352568 16354097 Bva12g02096 12 16352568 16354097 ECH