Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02094 ATGTTGGCCCCACCGTTCCAAGATGCTCTCAGAGCCCTAGAGCATGTGGAAGAAAGATCTGCCACAGACTGCCAGCTTCAGAACGCCATGAACGCCTTTGCCATAGCGACTGGTGCAGCTCTCTCTTTACCAAACTCTATTTGCAAATCATCTAGGCTTGACGTTAAGAAGGGTGCTAAAGGAAAATTTAGAGTGTTTGCTGTATTTAAAGAAGAGGTGGACAAGAAGAATGAATGGGGTGCGCTCTTTGACGTGGAGGATCCAAGATCTAAAGTCCCCCAGTATAAAGGAAAGTTTCTGGATGTATACCAAGCCCTAGAAGTGGCTAGATATGATATTCAGTACTTAGATTGGCGAGCTCGGCAAGATGTGCTTACCATCATGCTTCTCCATGAAAAGGTGGTGGAAGTTCTTAATCCTCTAGCTCGTGATTATAAGTCAATTGGCACCATGAAAAAGGAACTTGCAGAGTTGCAGGAAGAATTATCACAAGCACACAGACAGGTACATATATCTGAAGCAAGGGTATCTACTGCTTTAGATAAACTAGCTTATATGGAAGAATTGGTGAATGATAGGTTGCTGCAAGACAGAAGTGCGACCCAAGTTGACCAGACATCTCCCAGTACTTCTACACAATCTGCGGACGTTGGAAAGAGAAGGATTCCAAGGAAAAGCTTGGATGTATCAGGTCCAGTTCATCCCTATCATCCCCgtttaaagaatttttggtACCCTGTTGCTTTCTCAAATGATCTGAACGATGATACTATGaTCCCAATAGAATGTTTTGAGGAACCATGGGTTATCTTTAGAGGGAAAGATGGAAAACCTGGCTGTGTCCAGAATACCTGTGCACACAGAGCATGCCCTCTGCACCTTGGTTCTGTAAATGAGGGTCGTATCCAATGCCCCTACCATGGTTGGGAATATACGACTGATGGAAAATGTGAGAAAATGCCATCTACGCGACTGGTAAATGTAAAGATAAAGTCATTGCCATGTTTTGAACAAGAGGGGATGATTTGGATTTGGCCTGGCAATGATCCGCCAACAGCCACCATTCCATCTTTACTTCCTCCTTCTGGGTTTGAAGTTCATGCTGAGATTGTCATGGAACTTCCAGTAGAACATGGGTTACTTTTGGACAACCTATTGGATCTTGCACATGCCCCTTTTACTCACACTTCTACTTTTGCCAAGGGATGGAGTGTTCCAAGCTTGGTGAAATTTTTGACACCTTCATCAGGCCTGCAAGGATATTGGGACCCCTATCCCATTGATATGGAATTTCGACCACCTTGCATGGTTATATCAACCATAGGAATCTCTAAGCCGGGGAAACTGGAAGGACAAAGCACCAAGCAGTGTGCCACACACCTTCACCAACTTCATGTCTGCTTACCctcatcaaaacaaaaaacaagatTACTGTACAGAATGTCACTGGATTTTGCTCCTGTTCTTAAGCACATCCCTTTTATCCGCTACGTATGGAAGCATTTTGCTGAACAGGTTCTAAATGAGGATCTACGGCTAGTACTGGGCCAGCAAGAGAGAATGATCGAAGGTGCGAATGTATGGAATTCCCCTGTATCCTATGACAAGCTTGGAGTAAGGTACAGACTGTGGAGAGTTGCCTTGGAGCAAGGAGCTAAGCAACTACCCTTCAGCAAATA 1679 0.4366 MLAPPFQDALRALEHVEERSATDCQLQNAMNAFAIATGAALSLPNSICKSSRLDVKKGAKGKFRVFAVFKEEVDKKNEWGALFDVEDPRSKVPQYKGKFLDVYQALEVARYDIQYLDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQEELSQAHRQVHISEARVSTALDKLAYMEELVNDRLLQDRSATQVDQTSPSTSTQSADVGKRRIPRKSLDVSGPVHPYHPRLKNFWYPVAFSNDLNDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLVNVKIKSLPCFEQEGMIWIWPGNDPPTATIPSLLPPSGFEVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVPSLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVISTIGISKPGKLEGQSTKQCATHLHQLHVCLPSSKQKTRLLYRMSLDFAPVLKHIPFIRYVWKHFAEQVLNEDLRLVLGQQERMIEGANVWNSPVSYDKLGVRYRLWRVALEQGAKQLPFSK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02094 559 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 100 559 - -
Bva12g02094 559 Pfam Vanillate O-demethylase oxygenase C-terminal domain 377 401 IPR044043 GO:0016491
Bva12g02094 559 Gene3D - 366 554 - -
Bva12g02094 559 SUPERFAMILY ISP domain 240 349 IPR036922 GO:0051537
Bva12g02094 559 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 244 344 IPR017941 GO:0051537
Bva12g02094 559 PANTHER CHLOROPHYLLIDE A OXYGENASE, CHLOROPLASTIC-LIKE 100 559 - -
Bva12g02094 559 SUPERFAMILY Bet v1-like 340 549 - -
Bva12g02094 559 ProSitePatterns Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 285 307 IPR015881 GO:0005506|GO:0051537
Bva12g02094 559 Pfam Pheophorbide a oxygenase 431 525 IPR013626 GO:0010277
Bva12g02094 559 MobiDBLite consensus disorder prediction 199 220 - -
Bva12g02094 559 Gene3D - 238 361 IPR036922 GO:0051537
Bva12g02094 559 CDD Rieske_RO_Alpha_Cao 227 355 - -
Bva12g02094 559 Pfam Rieske [2Fe-2S] domain 244 325 IPR017941 GO:0051537
Bva12g02094 559 Coils Coil 148 175 - -
Bva12g02094 559 MobiDBLite consensus disorder prediction 199 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02094 Bva-Chr12 16336604 16340857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02094 K13600 - gmx:100806298 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02094 12 16336604 16340857 Bva12g02094 12 16336604 16340857 ECH