Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02089 ATGGCCTCAGATTTTGGCTTAACAGTTCCTCCAGAACTCGAATCAGCTTTGAGGCTTAAGACTGTTGAGTACTTCATTACGAGGAGGCCGTGGCTTGATCTTTATGGAGTTAACGTGAGACCTGTCGCACCAGTTGGAAGTGCAAGTAGAAAACCTTATGTGGATTCTGCACTTATACATCGTACTTTACCAGATGAACTTCTCTTTGAGGTCTTTGCTCGTATGACTCCATATAATTTGGGAAGGGCATCTTGTGTGTGTCGAAAATGGAGGTATACCATTCGTAACCCTGTTTTCTGGCGCAATGCATGCTTGAAGGCTTGGCAGATCTCTGGAATGGTAGAAAACTACAAGATCCTGCAATCAAAGTATGAAGGTTCATGGAGGAAAATGTGGCTCTTAAGACCTAGGTTGCGAACTGATGGCCTTTATGTGAGTCGGAATACCTACATCCGCGCTGGAGTTGCAGAGTGGAAGATCACTAATCCAGTTCACGTGGTTTGCTATTTCCGGTACATGAGGTTTTTTCCTTCCGGACGATTCCTTTACAAGAATTCTTCTCaaaaaatcaaggatgtcGCAAAGTGCATGAACTTTAGATCTGCTAAAGCAGACTGTGTTTTCAGTGGCCACTACACGTTATCAGATGACAAGGTTGAAGCTGCTGTCTTGTATCCAGGCTTGCGGCCTACTGTGTTAAGGATACGCTTGAGGATAAGAGGAACAACTGCTGGAGCTAACAATCGAATGGATTTGATCTCACTTGTGACGAGTGGTGTGAACGATAGTGAGGTTGGTGGACCTGAGGACGACATTCTTGGAGTTGTTGAGGGATGGCAAGACGATGAAACACACAACCCAGATGTGCCAGCAGTCTCACATAAGAGGGGCTTGAcaccttttgtttttgttccgTTTGAAGAGGTGGAGACATCGGTTTTGAATCTTCCTGTGGAGAAGATGGATTATTTTGTACCTGGTTG 983 0.4344 MASDFGLTVPPELESALRLKTVEYFITRRPWLDLYGVNVRPVAPVGSASRKPYVDSALIHRTLPDELLFEVFARMTPYNLGRASCVCRKWRYTIRNPVFWRNACLKAWQISGMVENYKILQSKYEGSWRKMWLLRPRLRTDGLYVSRNTYIRAGVAEWKITNPVHVVCYFRYMRFFPSGRFLYKNSSQKIKDVAKCMNFRSAKADCVFSGHYTLSDDKVEAAVLYPGLRPTVLRIRLRIRGTTAGANNRMDLISLVTSGVNDSEVGGPEDDILGVVEGWQDDETHNPDVPAVSHKRGLTPFVFVPFEEVETSVLNLPVEKMDYFVPG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02089 327 PANTHER F-BOX ONLY PROTEIN 9 13 311 - -
Bva12g02089 327 PANTHER F-BOX ONLY PROTEIN 48-RELATED 13 311 IPR045118 GO:0019005|GO:0031146
Bva12g02089 327 SMART fbox_2 63 103 IPR001810 GO:0005515
Bva12g02089 327 Gene3D - 47 141 - -
Bva12g02089 327 SUPERFAMILY F-box domain 61 139 IPR036047 GO:0005515
Bva12g02089 327 Pfam F-box only protein C-terminal region 117 327 IPR045464 -
Bva12g02089 327 Pfam F-box-like 61 106 IPR001810 GO:0005515
Bva12g02089 327 ProSiteProfiles F-box domain profile. 57 103 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02089 K10295 - gmx:100786704 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02089 12 16321640 16325865 Bva12g02089 12 16321640 16325865 ECH