Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02087 atgaaaattcaaaactttttgttttacttagCGGTTCTATTCTCTTTGATTGTTCTGGTCACCATAGACTCGGTGATCTCACTCGCCAAGCATATACCTTCCGCTTCTTACGACGGAGTCTTCTTCGGCGCCGATCGGAGCTGTTACAAGCCGGCTTTGCAATCTTCAATGGCTTGCAAAAACCAGACACGCCGAGGAACACCGGAGTTAAGCTGTGATGTGTGGAGCAAAGCGTGCTCGGAGGCGGTGCTGAGGATAGCGCAGCGGCCGGAGACGGTGAAGTGGTTGAAAGCCGTGAGAAGGAGGATCCACGAGAATCCCGAGCTGGCTTTTGAGGAATTCGAGACGAGCCGTTTGATAAGAGAGGAGTTGGATCTGATGGAGGTTAGTTACCGGTATCCTTACGCTAAGACCGGTATCCGGGCGAGGATCGGTACAGGAGGTCCGCCTTTTGTTGCCATTAGAGCTGACATGGATGCACTTCCTATTCAGGAAGCAGTTGAATGGGAGTACAAATCTAAAGTTGCTGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCCATGCTTGTGGGTGCTGCCAAGATCTTGAAGAGTCGCGAACATTTATTAAAGGGAACTGTAATTCTGCTATTCCAGCCAGCAGAGGAAGCTGGCAATGGTGCAAAGAGAATGATACAAGAAGGTGCTTTGGAGGATGTGGAGGCCATTTTTGCTGTTCATGTATCTCACGAATATGCAACTGGAATTATCGGGTCGAGGCCGGGACCTCTACTAGCTGGGTGTGGTTTTTTCAGAGCTGTTATCAGTACAAATAATGCTCGTATTGGAAGAAGACACAACACTGTTGATCCTGTTTTGGCAGCTTCGGCTGCCGTTATCAGCTTACAGGGTATTGTGTCACGTGAAGCCAATCCATTGGACTCACAGGTTGTCTCGGTGACGTCTTTTAATGGAGGCAACGAACTTGACACACTACCGGACACAGTGGTCCTTGGTGGAACCTTTAGGGCTTTCTCTAACACAAGTTTTTACCAGATTCTTGAAAGAATAGAACAGGTAATTGTGGAACAGGCAAGTGTTTACAGATGCTCTGCCGAGGTTGATTTCTTTGAGAAGGAATACGCGATTTACCCTCCCACAGTAAATGATGAGCACATGTATGAACATGTAAAGAAGGTAGCAATCGATTTGGTGGGTGCAAAGAATTTCAAGGTAGTCCCACCTATGATGGGTGCCGAAGATTTCTCGTTTTACTCAGAGGTGGTTCCTGCGGCTTTCTTCTTTGTAGGAATAAAGAATGAGACATTGGGGTCTGTTCACACAGGACACTCACCTTATTTCATGATTGACGAAGACAGTCTTGCCATTGGCGCTGCTACTCATGCCACCATTGCAGAGAGGTATCTCCTTGAACATGGCTA 1427 0.4702 MKIQNFLFYLAVLFSLIVLVTIDSVISLAKHIPSASYDGVFFGADRSCYKPALQSSMACKNQTRRGTPELSCDVWSKACSEAVLRIAQRPETVKWLKAVRRRIHENPELAFEEFETSRLIREELDLMEVSYRYPYAKTGIRARIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLVGAAKILKSREHLLKGTVILLFQPAEEAGNGAKRMIQEGALEDVEAIFAVHVSHEYATGIIGSRPGPLLAGCGFFRAVISTNNARIGRRHNTVDPVLAASAAVISLQGIVSREANPLDSQVVSVTSFNGGNELDTLPDTVVLGGTFRAFSNTSFYQILERIEQVIVEQASVYRCSAEVDFFEKEYAIYPPTVNDEHMYEHVKKVAIDLVGAKNFKVVPPMMGAEDFSFYSEVVPAAFFFVGIKNETLGSVHTGHSPYFMIDEDSLAIGAATHATIAERYLLEHG 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02087 475 TIGRFAM amidohydrolases: amidohydrolase 98 459 IPR017439 GO:0016787
Bva12g02087 475 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 42 474 - -
Bva12g02087 475 PANTHER PEPTIDASE M20 FAMILY MEMBER 42 474 IPR017439 GO:0016787
Bva12g02087 475 SUPERFAMILY Bacterial exopeptidase dimerisation domain 262 371 IPR036264 -
Bva12g02087 475 Gene3D - 261 380 - -
Bva12g02087 475 CDD M20_IAA_Hyd 96 471 IPR044757 GO:0009850|GO:0016787
Bva12g02087 475 Gene3D Zn peptidases 98 464 - -
Bva12g02087 475 Pfam Peptidase family M20/M25/M40 153 468 IPR002933 GO:0016787
Bva12g02087 475 SUPERFAMILY Zn-dependent exopeptidases 91 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02087 Bva-Chr12 16303554 16309607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02087 K21604 - gmx:100785666 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02087 12 16303554 16309607 Bva12g02087 12 16303554 16309607 ECH