Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02085 ATGGCGGAAAGGATTTCggtttgcttcttctttgtcTTTGTTTTATCTCTCATCGCATCGTTGCCCAAGCAGATCTCGGCGGATGAATCTGCAGAAGGCAAGGAGTTCGTGCTCACTTTGGACCACTCTAACTTCTCTGACACTGTTAGCAAGCACAATTTCATCGTCGTCGAGTTCTACGCACCTTGGTGTGGCCACTGTAAGAAGCTCGCTCCAGAGTACGAGAAAGCTGCTTCTATCTTGAGTAGTCATGACCCTCCAATTGTTTTGGCTAAAGTTGATGCCAATgaggaaaagaacaaagaaattgCGAGTGAATTCGATGTTAAGGGATTCCCAACAATTAAGATACTGAGAAATGGAGGAAAGAATATTCAAGAATACAAAGGTCCTCGTGAGGCTGATGGTATCGTTGATTAtcttaagaaacaaaatggcCCTGCATCAACCGAAATTAAGTCTGCTGATGATGCTAGTGCTTTTATTGgtgaaaataaagtttttattGTTGGGGTTTTCCCAAAATTTTCTGGGGAAGAGTTTGAGAATTTCACTGCTTTAGCAGAGAAATTGCGGTCTGACTATGACTTTGGTCATACCTTGAATGCCAAACACCTTCCACGGGGAGAATCATCAGTGTCTGGACCCCTCGTTCGATTGATCAAGCCATTCGATGAACTGTTTGTAGATTTCCAGGATTTCCATCTGGAAGCTCTAGAgaaatttattgaagaaaCAAGTGTCCCACTTGTGACGATCTTTAACAATGACCCAAGCAATCACCCTTATGTTATCAAATACTTCAACAATCCCCATGCAAAGGCAATGTTATTTATCAACTTCACTTCTGAAGACTTTGATTCTTATAAGTCAAAGTATCATGAAGCCGCTGAGCAATATAGACAAGATGGGCTAAGCTTTTTGGTAGGAGATGTTGAGGCCAGTCAAGGTGCCTTCCAGTATTTTGGACTTAAGGAAGACCAAGTGCCTCTTATTGTCATACAACATAATgatggaaagaaatttttaaagcCGAAATTGGAAGCCGGTCACATTCCAACTTGGTTGAAGGCATACAAGGCTGGAGAGGTTCAACCATATAAGAAATCTGAACCTATTCCAGAAGTTAATAATGAGCCTGTCAAAGTTGTAGTTGCAGACACCCTTCAAGATATTGTTTTCAACTCAGGGAAAAATGTTTTGTTGGAGTTCTATGCTCCATGGTGTGGTCATTGCAAGAAGTTGGCTCCAATATTGGAAGAAGTTGCTGTCTCGTATCAAAATGATGCTGACGTTGTTATTGCAAAACTGGATGCTACTGCCAATGATATCCCAAGTGATACCTTTGATGTCCAAGGTTATCCAACACTCTACTTTCGGTCAGCAAGTGGAAAGATAACACACAAGAACAAGCAACTCCTCAgcaagaaggagaaaaagatgAGCTTTGAAAAGGCAAGCAGCTGTAGGAGAGGATA 1478 0.3843 MAERISVCFFFVFVLSLIASLPKQISADESAEGKEFVLTLDHSNFSDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPIVLAKVDANEEKNKEIASEFDVKGFPTIKILRNGGKNIQEYKGPREADGIVDYLKKQNGPASTEIKSADDASAFIGENKVFIVGVFPKFSGEEFENFTALAEKLRSDYDFGHTLNAKHLPRGESSVSGPLVRLIKPFDELFVDFQDFHLEALEKFIEETSVPLVTIFNNDPSNHPYVIKYFNNPHAKAMLFINFTSEDFDSYKSKYHEAAEQYRQDGLSFLVGDVEASQGAFQYFGLKEDQVPLIVIQHNDGKKFLKPKLEAGHIPTWLKAYKAGEVQPYKKSEPIPEVNNEPVKVVVADTLQDIVFNSGKNVLLEFYAPWCGHCKKLAPILEEVAVSYQNDADVVIAKLDATANDIPSDTFDVQGYPTLYFRSASGKITHKNKQLLSKKEKKMSFEKASSCRRG 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02085 492 ProSitePatterns Thioredoxin family active site. 56 74 IPR017937 -
Bva12g02085 492 PANTHER PROTEIN DISULFIDE ISOMERASE 6 471 - -
Bva12g02085 492 CDD PDI_b_family 149 245 - -
Bva12g02085 492 ProSitePatterns Thioredoxin family active site. 401 419 IPR017937 -
Bva12g02085 492 SUPERFAMILY Thioredoxin-like 37 147 IPR036249 -
Bva12g02085 492 SUPERFAMILY Thioredoxin-like 246 378 IPR036249 -
Bva12g02085 492 ProSiteProfiles Thioredoxin domain profile. 359 488 IPR013766 -
Bva12g02085 492 Pfam Thioredoxin 381 468 IPR013766 -
Bva12g02085 492 Pfam Thioredoxin 37 143 IPR013766 -
Bva12g02085 492 CDD PDI_a_family 38 141 - -
Bva12g02085 492 Gene3D Glutaredoxin 27 145 - -
Bva12g02085 492 Gene3D Glutaredoxin 146 249 - -
Bva12g02085 492 PRINTS Thioredoxin family signature 55 63 - -
Bva12g02085 492 PRINTS Thioredoxin family signature 63 72 - -
Bva12g02085 492 PRINTS Thioredoxin family signature 108 119 - -
Bva12g02085 492 Gene3D Glutaredoxin 375 486 - -
Bva12g02085 492 ProSiteProfiles Thioredoxin domain profile. 15 146 IPR013766 -
Bva12g02085 492 TIGRFAM pdi_dom: protein disulfide-isomerase domain 41 144 IPR005788 GO:0003756
Bva12g02085 492 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Bva12g02085 492 CDD PDI_b'_family 263 360 - -
Bva12g02085 492 Gene3D Glutaredoxin 250 374 - -
Bva12g02085 492 PANTHER PROTEIN DISULFIDE-ISOMERASE 6 471 - -
Bva12g02085 492 SUPERFAMILY Thioredoxin-like 354 470 IPR036249 -
Bva12g02085 492 Pfam Thioredoxin-like domain 173 357 - -
Bva12g02085 492 TIGRFAM ER_PDI_fam: protein disulfide isomerase 37 465 IPR005792 GO:0003756
Bva12g02085 492 CDD PDI_a_PDI_a'_C 380 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02085 Bva-Chr12 16288840 16292711 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02085 K09580 - gmx:100170705 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02085 12 16288840 16292711 Bva12g02085 12 16288840 16292711 ECH