Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02080 ATGTCTGCACCCGGTTACGCCCGCTCCCAAAGAGCCTCTTCCACCGTCTCGCCGTTCCGGTCACGGAAGTCCCCGGCTCCACCGCCGCCGGTGAAGAAACCAACCGGGAGACCTGTTACTCCGTCTTCAACCTCTTCATCAAGGCCTTCGCCCAAATTGTCTGTCTCTCCCGTGAACAGTGCCAGCCCTCAGACCCTTGAAAGGCCTGATGTAAGCAAGGCAAAGGAGAATGTGACTGTCACGGTCCGGTTTCGACCACTCAGTGCCAGAGAACTCAATAAAGGGGACGAGATAGCATGGTATGCAGATGGAGATCATATAGTCAGAAATGAGTACAATCCCTCCGTCGAATATGGATTCGATAAGGTGTTTGGGCCCGCTACTACAACTCGACATGTTTATGATGTGGCTGCTCAGCATGTTGTTAGCGGTGCCATGGAAGGAATTAACGGTACTGTATTTGCATATGGTGTTACTAGCAGTGGAAAGACTCATACCATGCATGGTGAGCAAAAGTCACCTGGAATTATTCCACTGGCAGTGAAGGATGTCTTCAGTATCATACAAGAGACACCAGGGCGGGAATTCCTACTCCGTATCTCCTATCTTGAGATTTACAATGAGgTCATCAATGACTTGCTGGATCCAACCGGGCAGAACTTAAGAATACGAGAGGATGCTCAGGGGACTTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTGTCCCCTGCTCATGCTCTTTCTTTGATTGCTTCAGGAGAAGCACATAGACACGTGGGTtctaataatttgaatttagttaGCAGCCGAAGTCATACTATATTTACCTTGACAATTGAAAGCAGTCCACGTGGGGAAAATATAGGAGAAGAAGATGTGATATTGTCCCATTTGAATTTAATTGATCTTGCTGGATCAGAAAGTTCTAAAGCTGAAACAACTGGGTTGAGGAGGAAAGAGGGctcatatattaataaaagctTGCTCACTCTTGGAACGGTGATCTCTAAATTAACCGATGGAAAGGCAACTCATATTCCTTACCGAGATTCAAAGCTTACTCGTTTATTGCAATCTTCCCTTAGTGGCCATGGACGGATATCTCTCATCTGCACTGTTACCCCTGCGTCCAGTAGCAGTGAAGAGACACACAACACGTTGAAATTTGCACACCGAAGTAAGCATGTTGAGATCAAAGCTTCTCAAAATAAGATTTTGGACGAGAAGTCTCAGATAAAGAAGTACCAGAAGGAAATTTCTGATCTAAAGGAGGAGCTTCAGCAGTTGAAACGTGGCATGATGGAAAATCCCAATATGGCTGCATCTTCACCAGAAGATttggtcaatttgaagcttcaGCTGGAAGCCGGCCAATCCAAATTACTGTCAAGATTGGAAGAGGAAGAGCAAGCAAAAGCAGCGTTGATGGGAAGAATTCAGCGTTTGACCAAACTAATCTTGGTTTCCACAAAGAATTCAATGGCATCAAGCATTCCTGAAAGGCCTGGCAACAGGCGGAGACATTCTTTTGGAGAAGATGAGTTAGCATATCTGCCAGATAGAAAACGTGATCAATTGATTGATGATGATGCTGGAAGCTATGCTTCAGAGCTTTCAGTGGACGGAAAGAACGACATTACCAATTTAGATGAGTTGGTGAAAGATtataaaaggaacaaaaaacGAGGAATGCTTGGTTGGTTCAAGCTAAGAAAACCTGAGAATCTGATTGGGTCATCACTAAATGTTGATAGTGATGGCTCTGCAAATGGGTCACCCGCATCCGCTTCAAAATTAACTCCAAATAAAGTTACGCTTTATGACATGGAAGACTCTCGCAGGAATTCAACCAGCAGAAAGGATAATGCTTCAGCTCTGAATTCCCTTGCTGGAAGAAATCAAGCAGGTGACTTGTTTAGCGTAACAGCTGGTGGTCGCCAACTTCCTCCAACTGGAACCACAATTACCGATCAAATGGATCTTCTTCGTGAACAAGTGAAAATGTTGGCTGGGGAGGTGGCATTTTGTACCAGTTCTCTGAAAAGATTGTCTGAACAAGCAGCTGATAAACCTGATGATTTGCAACTACACGATTACATGCAGAAGTTGAAGGATGAAATTAGCCAAAAGAAGAACCAAATCCGTATTTTGGAGAAACGTATGATTAAATCATTTGGGATGACTCCACATGCACCAAGTAGCAGCGAAATATCTCAGGCTCTGTCCAAGCTTACTATTGAGctcaatgaaaaaattttcgAACTTGAGATCAAGGCTGCAGACAATAGAATACTTCAAGAACAGCTACAGTTGAAGAATTCGGAGAATGCTGAGATGCAACAGACAATTCTTTCGCTAAGGCAACAGCTAAATTTATCGCTGGATAAAAACTCCACTGATTCGCAATGGTTTTTGGGTAGTGAGACTGATGTGCGCAACATGTTTTCCAAAGAGATTTTGGATAAGACTCAGGAACTACCTGGTGTCACGAGatcaaatacaatattttctcAAGAGGACTCCAAGCAGGGCAGTGACGATTCATCTTTGAATTCTCAAATTCTCATGCAGGCAgctgaaatagaaaatttgaaacaagaGAAAGTGAGACTGGTTGAAGAGAGGGATGGGCTTGAAATTCAGTGTCAGAAACTTGCAGAGGAAGCTTCATATGCAAAAGAACTGGCCTCGTCTGCAGCAGTTGAACTCCAAAACCTGGCTGAAGAAGTAACTAAACTGTCTTATGAAAATGCCGAACTAACTGGCGATCTGGCAGCTGCAAAGGAGGCTTGCTGTAAACCATACTTGTGTCAGAGGTGTGCTTCATATGATCACAGGCTAAGTATCAATGGTGTTCAACACGATGAGCGATTCAGAAAGCAAGGGAATGATGTTCTAATTGAGGAGTTGCAGAAGGACCTTGATGCTAAATGCCATAGAGAAGCTGCATTAGAAGCAGCTCTATCTGTGAAAGATCAAATAGAAGCTGAACTTAGAAGAAGGCTTGATGAAGCAAAACATCGTGAAGAAGATTTAGAAAATGAGCTTGCAAGTATGCAGGTGCTGTTTGCAAAGATGAGAAAGTCTGACATTAGTGTTGAGGAAATGTCGACAGTTCATATGCACAATGACATACAAACCAGGTTCAGAAAAGGAACTCTTCCATCAAATGGTTATTCTTATAGGAAAACATACAAAGAGGATGAGACTTTTGCAATCATGGAAGAACTTAAAACTAGTtatcaaagagaaagaagaagatgcaaaGAACTAGAAAACCTTATTTCTAGATTGAAGGGTGAAGATATCGCTGGTCTGGATGTTATGGCCCTTGAAGAACTCCAAAACCTGCATATTGAGGCAATAACAAAGATTTGCCATGCAAAGTTTGCAAATCAAGACTTGTA 3407 0.4144 MSAPGYARSQRASSTVSPFRSRKSPAPPPPVKKPTGRPVTPSSTSSSRPSPKLSVSPVNSASPQTLERPDVSKAKENVTVTVRFRPLSARELNKGDEIAWYADGDHIVRNEYNPSVEYGFDKVFGPATTTRHVYDVAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFSIIQETPGREFLLRISYLEIYNEVINDLLDPTGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIASGEAHRHVGSNNLNLVSSRSHTIFTLTIESSPRGENIGEEDVILSHLNLIDLAGSESSKAETTGLRRKEGSYINKSLLTLGTVISKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSSSEETHNTLKFAHRSKHVEIKASQNKILDEKSQIKKYQKEISDLKEELQQLKRGMMENPNMAASSPEDLVNLKLQLEAGQSKLLSRLEEEEQAKAALMGRIQRLTKLILVSTKNSMASSIPERPGNRRRHSFGEDELAYLPDRKRDQLIDDDAGSYASELSVDGKNDITNLDELVKDYKRNKKRGMLGWFKLRKPENLIGSSLNVDSDGSANGSPASASKLTPNKVTLYDMEDSRRNSTSRKDNASALNSLAGRNQAGDLFSVTAGGRQLPPTGTTITDQMDLLREQVKMLAGEVAFCTSSLKRLSEQAADKPDDLQLHDYMQKLKDEISQKKNQIRILEKRMIKSFGMTPHAPSSSEISQALSKLTIELNEKIFELEIKAADNRILQEQLQLKNSENAEMQQTILSLRQQLNLSLDKNSTDSQWFLGSETDVRNMFSKEILDKTQELPGVTRSNTIFSQEDSKQGSDDSSLNSQILMQAAEIENLKQEKVRLVEERDGLEIQCQKLAEEASYAKELASSAAVELQNLAEEVTKLSYENAELTGDLAAAKEACCKPYLCQRCASYDHRLSINGVQHDERFRKQGNDVLIEELQKDLDAKCHREAALEAALSVKDQIEAELRRRLDEAKHREEDLENELASMQVLFAKMRKSDISVEEMSTVHMHNDIQTRFRKGTLPSNGYSYRKTYKEDETFAIMEELKTSYQRERRRCKELENLISRLKGEDIAGLDVMALEELQNLHIEAITKICHAKFANQDL 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02080 1135 Pfam Kinesin motor domain 83 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 Coils Coil 1074 1101 - -
Bva12g02080 1135 PRINTS Kinesin heavy chain signature 262 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 PRINTS Kinesin heavy chain signature 297 315 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 PRINTS Kinesin heavy chain signature 148 169 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 Coils Coil 700 720 - -
Bva12g02080 1135 Coils Coil 465 485 - -
Bva12g02080 1135 Coils Coil 854 888 - -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 581 602 - -
Bva12g02080 1135 Gene3D Kinesin motor domain 68 427 IPR036961 -
Bva12g02080 1135 ProSiteProfiles Kinesin motor domain profile. 77 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 MobiDBLite consensus disorder prediction 1 21 - -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 830 849 - -
Bva12g02080 1135 SMART kinesin_4 75 404 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bva12g02080 1135 CDD KISc_CENP_E 77 396 - -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 1 74 - -
Bva12g02080 1135 Coils Coil 967 987 - -
Bva12g02080 1135 Coils Coil 903 923 - -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 581 629 - -
Bva12g02080 1135 Coils Coil 995 1022 - -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 37 67 - -
Bva12g02080 1135 PANTHER KINESIN-LIKE PROTEIN KIN-7C, MITOCHONDRIAL 62 1121 - -
Bva12g02080 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 431 IPR027417 -
Bva12g02080 1135 MobiDBLite consensus disorder prediction 22 36 - -
Bva12g02080 1135 Coils Coil 398 432 - -
Bva12g02080 1135 PANTHER CENTROMERE PROTEIN E 62 1121 - -
Bva12g02080 1135 Coils Coil 757 789 - -
Bva12g02080 1135 ProSitePatterns Kinesin motor domain signature. 296 307 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02080 Bva-Chr12 16251530 16260722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02080 69 730 Miscellaneous Gene Families AT5G06670 59.342 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02080 K11498 - gmx:100817131 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02080 12 16251530 16260722 Bva12g02080 12 16251530 16260722 ECH