Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02074 ATGACGCTTCCGGCGAAGGTGGTGATGGGTTGGTGGCGGTGCTCACTTGCATTGTTTTTCGTGGTTGCTTTGGCCACCGTTCACGGTGGTAGTGTCACCTATGATGGAAGATCATTAATCATCAATGGCCAACATAAGATACTCTTCTCAGGCTCAATTCACTATCCTCGAAGCACCCCCGAGATGTGGCCTGATTTAATTTCGAAAGCTAAAGAAGGAGGTTTGGATGGGATAGAAAGTTACGTGTTTTGGAACCTTCACGAGCCCAAACAAGGGCAGTTTGACTTCAGTGGCAGGCGAGATTTAGTGAGGTTCATTAAGGAAATCCAAGCACAAGGTTTATATGCCACCCTCAGAATTGGTCCATTCATCGAGAGTGAATGGACATATGGTGGTTTCCCAGTTTGGTTACACGATGTTCCGGGTATCGTTTTCAGATCAGATAACGAGGCATTCAAGTATCACATGCAAAGGTTCACAAGCAAGATAGTGAGCATGATGAAGTCAGCGAAGCTGTATGCCTCACAAGGAGGGCCAATCATACTATCACAGATTGAGAATGAGTACGGTATGGTTGAAAAGGCTTACCACGAGGGAGGACCCTCTTATGTTCGTTGGGCTGCAGAAATGGCTGTGGGACTTCAAACTGGTGTGCCCTGGATAATGTGCAAGCAAGATGATGCTCCTGATCCAGTGATCAATACGTGCAATGGCTTGGAATGTGGGAAGAGATTTATGGGACCTAACTCGCCAAATAAGCCTGCTCTATGGACAGAGAATTGGACATTTAGGTATCAAACCTTTGGTGAAGAAGCCCAGTTGAGATCAGTTGAAAACATTGCATACAATGTTGCCTTGTTCATCATTGCAAAAAAGGGAAGCTATGTCAATTACTATATGTATCATGGAGGAACCAACTTCGACAGAACAGCCTCTGCTTTCACACTTACATCTTATTACGATCCAGCTCCGCTAGATGAGTATGGTTTGATCAGGCAACCAACATGGGGCCATCTTAAGGAACTACATGCTGCAATCAAGCTATGCTCAGAGCCTTTACTTTATGGAACACAGAATGTAATCAGTTTGGGTAATCTACAAAAcGCGTATGTTTTCAGAGGAAGCTCAGGCAAGTGTGCAGCTTTCCTGGAAAACAGTGCTGGCCAAGAAGCGAGAGTCATATTTCATAATGTTCCATACACACTGCCTCCAAATTCAATTAGTATCCTACCAGATTGCAAGAATGTGGTCTTCAACACTGCCAAGGTGAGCACACAATACAATACCAGATCAATGACACCTAGAGTAAAATTTGATTCGAGTGCAAAATGGGAAGTCTACAAAGAAGCCATTCCAAATTTCCATGATACTTCCATAAGAGCAAACAAACTATTAGATCAGATTGGCACGGCAAAAGATACATCTGATTATCTATGGTACACTTTCAGGTTGAATCAGAATTCTCCTAGTCTTAAATCTGCTCTTAGTGTATATAGCCATGGACATGTTGTGCATGCATATATCAATGGAGTTTTAGTAGGTTCTGCGCATGGCACTCTCAAGGATCCAACTTTCACTATGGAGAACAACGTCAATCTGAGAAGGGGGGAGAACAGCATTTCCTTGCTTAGTGCGACGGTTGGATTGCCGGATTCAGGAGCATACCTAGAACGTAGAGATGCTGGTTTACGTAGGGTGCAAGTTGATGGCAGAGATCTCAGTAATTATACATGGGGATACCAGGTTGGGTTGCTAGGAGAGAAATTGCAAATCTTTACACCCCTTGGATCAAGTAAAGTTCGATGGGAAAAGCTTAGAGGCTCTACTCAATCACTCACGTGGTATAAGACCACCTTTGATGCACCGGCAGGAAATAATCCTGTCGCACTCAACCTAGGTTCTATGGGAAAGGGTGAAGCTTGGATTAATGGCAATAGTATTGGTCGATATTGGGTATCATTCCGGACACCAAAGGGGACTCCTTCACAGACATGGTATCATGTACCTGGATCCTTCCTAAAACCTACTGGTAACCTACTAGTtttacaagaagaagaaagcggGAACCCCCTACAGATTTCTCTGGATACAATATCAGTAACAAAAGCATGTGGGtatgttttaaaatcatatttgcCCCCAGTGACTTCATGGAGGGTAGAAACAAGGAAATATACTAAAAGTCAACGTGGAACACCTAAACTCCAACTAAACTGTCCAGCAAACAGTACTGTATCCAGAATCTTGTTTGCAAGCTATGGACAACCTACGGGTAACTGTCTGAGTGAGTATAAAACCATCACAAGGTGTCATTCACCCAATTCTAAAGCTGTCGTCACAAAGGCTTGTCTAGGGAAAACAAGATGTTCGATCGGAGTAAGGAGCAAAATTTTTGGGGCTGACCCATGTCCAAATGGTCAAAAAGCTCTATTAGTTGAAGTACAGTGCGCATCATA 2456 0.4292 MTLPAKVVMGWWRCSLALFFVVALATVHGGSVTYDGRSLIINGQHKILFSGSIHYPRSTPEMWPDLISKAKEGGLDGIESYVFWNLHEPKQGQFDFSGRRDLVRFIKEIQAQGLYATLRIGPFIESEWTYGGFPVWLHDVPGIVFRSDNEAFKYHMQRFTSKIVSMMKSAKLYASQGGPIILSQIENEYGMVEKAYHEGGPSYVRWAAEMAVGLQTGVPWIMCKQDDAPDPVINTCNGLECGKRFMGPNSPNKPALWTENWTFRYQTFGEEAQLRSVENIAYNVALFIIAKKGSYVNYYMYHGGTNFDRTASAFTLTSYYDPAPLDEYGLIRQPTWGHLKELHAAIKLCSEPLLYGTQNVISLGNLQNAYVFRGSSGKCAAFLENSAGQEARVIFHNVPYTLPPNSISILPDCKNVVFNTAKVSTQYNTRSMTPRVKFDSSAKWEVYKEAIPNFHDTSIRANKLLDQIGTAKDTSDYLWYTFRLNQNSPSLKSALSVYSHGHVVHAYINGVLVGSAHGTLKDPTFTMENNVNLRRGENSISLLSATVGLPDSGAYLERRDAGLRRVQVDGRDLSNYTWGYQVGLLGEKLQIFTPLGSSKVRWEKLRGSTQSLTWYKTTFDAPAGNNPVALNLGSMGKGEAWINGNSIGRYWVSFRTPKGTPSQTWYHVPGSFLKPTGNLLVLQEEESGNPLQISLDTISVTKACGYVLKSYLPPVTSWRVETRKYTKSQRGTPKLQLNCPANSTVSRILFASYGQPTGNCLSEYKTITRCHSPNSKAVVTKACLGKTRCSIGVRSKIFGADPCPNGQKALLVEVQCAS 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02074 818 Pfam Galactose binding lectin domain 737 816 IPR000922 GO:0030246
Bva12g02074 818 Gene3D Glycosidases 27 350 - -
Bva12g02074 818 SUPERFAMILY (Trans)glycosidases 29 349 IPR017853 -
Bva12g02074 818 PANTHER BETA-GALACTOSIDASE 16 807 - -
Bva12g02074 818 SUPERFAMILY Galactose-binding domain-like 407 560 IPR008979 -
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 175 190 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 294 309 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 118 137 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 42 59 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 256 271 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 313 329 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 610 624 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 63 81 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 PRINTS Glycosyl hydrolase family 35 signature 637 653 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 Gene3D - 588 703 - -
Bva12g02074 818 PANTHER BETA-GALACTOSIDASE RELATED 16 807 IPR001944 GO:0004553|GO:0005975
Bva12g02074 818 ProSiteProfiles SUEL-type lectin domain profile. 729 817 IPR000922 GO:0030246
Bva12g02074 818 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 177 189 IPR019801 GO:0004553|GO:0005975
Bva12g02074 818 Gene3D - 718 818 IPR043159 -
Bva12g02074 818 SUPERFAMILY Galactose-binding domain-like 577 722 IPR008979 -
Bva12g02074 818 Pfam Glycosyl hydrolases family 35 38 345 IPR031330 -
Bva12g02074 818 Pfam Beta-sandwich domain in beta galactosidase 353 423 IPR041392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02074 Bva-Chr12 16212643 16218500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02074 9 701 Glycoside Hydrolase AT5G63800 58.274 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02074 - - qsu:112033890 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02074 12 16212643 16218500 Bva12g02074 12 16212643 16218500 ECH