Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02073 ATGCATTCACTTAGACCGATTCAGGTGATGAAGAGAACACGATCCAACGCAGCAATCTCCTCTTCCAAATTGGCAACTCCTCCATCAACGCCTCCAACTCCACAAACTCTCTACAGAACCCGCCACTCCAAGGCGACCTCAATCTCCGCCTGTTATAGCTCTAAGAAACCAAAAACCATTCTTAAAACCCTTAAAGCTTCAACAGAAACCGATCCAACAAAGTGGGTACCTCTTAGTTTTACTCAAGCAGAGCTCTACTTGCCACTCACTTTCCCCACTGGTCAAACCTTCCGGTGGAAGAAGACTGGGCCCCTTATGTACACGGGCGTTGTCGGGTCTCACCTTGTATCCCTCAAGCATATTGAAAACGGCGATGTTTGTTACTTCCTTCACAATTGTACCTCTGAGGATGATGCGAGGACGGCTTTACTTGATTTTCTCAATGCAAGTGTTTCTCTCACTGACATTTGGAAGGTGTTCTCGGCATCAGATGACAGGTTTTCCGAGTTGGCGCGTCATTTGGGTGGAGCCAGAGTGCTCAGGCAAGACCCCCTTGAGTGTTTGATTCAGTTTCTGTGTTCTTCAAATAACAATATTGGAAGAATTACCAAGATGGTTgattatatttcttctttgggAGATTACTTGGGGACAGTTGAAGGTTTTAGATTCCATGCTTTCCCAACACTGCAGCAGTTATCATTGATTTCAGAGGAAGAGCTTAGAGAAGCTGGTTTTGGTTACAGGGCCAAATATATAATCGGCACCGTAAATGTTTTGCAAAAGAAAACTGTTGGAGGTGTAGAATGGCTCGAGTCTCTTCGTAAGTTGGATCTTCAAGAGGTAATAGATTCCCTTTGCACGTTACCTGGAGTCGGTCCTAAGGTGGCTGCTTGTATAGCTCTCTTCTCACTTGATCAACACCATGCCATTCCTGTTGACACGCATGTGTGGCAGATTGCTATAAAGTATCTCTTACCTGAGCTTGCAGGTTCCCGTTTGACCCCAAAGCTCTGCAGTCGTGTTGCAGACGCATTTGTAAGCAAATATGGTAAATATGCTGGCTGGGCTCAAACTCTCCTTTTCATAGCTGAATTACCTTCACAAAAAGCTCTTCTTCCTTCACATCTGTGGACTATCGAACAGCGCAATCATGCAAAGGAACGGTA 1169 0.4457 MHSLRPIQVMKRTRSNAAISSSKLATPPSTPPTPQTLYRTRHSKATSISACYSSKKPKTILKTLKASTETDPTKWVPLSFTQAELYLPLTFPTGQTFRWKKTGPLMYTGVVGSHLVSLKHIENGDVCYFLHNCTSEDDARTALLDFLNASVSLTDIWKVFSASDDRFSELARHLGGARVLRQDPLECLIQFLCSSNNNIGRITKMVDYISSLGDYLGTVEGFRFHAFPTLQQLSLISEEELREAGFGYRAKYIIGTVNVLQKKTVGGVEWLESLRKLDLQEVIDSLCTLPGVGPKVAACIALFSLDQHHAIPVDTHVWQIAIKYLLPELAGSRLTPKLCSRVADAFVSKYGKYAGWAQTLLFIAELPSQKALLPSHLWTIEQRNHAKER 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02073 389 PANTHER N-GLYCOSYLASE/DNA LYASE 73 379 - -
Bva12g02073 389 Gene3D - 157 366 IPR023170 -
Bva12g02073 389 Pfam HhH-GPD superfamily base excision DNA repair protein 189 323 IPR003265 GO:0006284
Bva12g02073 389 SUPERFAMILY TATA-box binding protein-like 70 182 - -
Bva12g02073 389 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 73 379 - -
Bva12g02073 389 MobiDBLite consensus disorder prediction 12 26 - -
Bva12g02073 389 Gene3D - 63 147 - -
Bva12g02073 389 Gene3D Hypothetical protein; domain 2 183 307 - -
Bva12g02073 389 SMART endo3end 193 366 IPR003265 GO:0006284
Bva12g02073 389 CDD ENDO3c 186 363 IPR003265 GO:0006284
Bva12g02073 389 MobiDBLite consensus disorder prediction 12 35 - -
Bva12g02073 389 SUPERFAMILY DNA-glycosylase 183 364 IPR011257 GO:0003824|GO:0006281
Bva12g02073 389 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 78 188 IPR012904 GO:0003684|GO:0006289|GO:0008534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02073 K03660 - csin:114288451 529.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02073 12 16209330 16212267 Bva12g02073 12 16209330 16212267 ECH