Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02067 ATGAAGGTTTCGAtctcactttttcttctgcttctaCTCCGTTTCCTAACATCTTTATCCATTTTAGCTGCGGAACATGATGCATCCAGCATCATCTTCACTACGCTTGGCAGAAGTTACTATGCCTTCGATATCTATAGTCTCTCGACCCTAGAGCCACCCAAAGCTAACAGTGAAATACGAATCACAGATGGCCAATCCGTCAATTTTAACGGTCAATTCCCTTCTCCGTCGTCTTCCTCCTTCCTTCTCTCCCTCCTGCCTAACACTACTGGCATCCGGGTATCAACCGACCCGCCTCCTCTGCATCTTGTTTACGTGACTGAGAGAAACGGAGTCTCTAACATATACTGCGATGCAGTTTACTATGATGATTCCAGAATCACAAGAAGAAGATCCGCCCTTGAATTCATCACGGATAGAGTTCAGATACCTCTTCTGACTAATCAGCTCAGGGAAAATAGAGTTTCAATGAAGGATAAGCCTAGTTTGACTGGGGAGCATTTGATTTACGTATCGACCCATGAGAACCCTGGCGTGCCAAGAGCGAGTTGGGCTGCGGTTTACTCGACCCACTTGAAATCGGGTCTGACCCGGAGGTTGACTCCTTATGGGGTTGCGGATTTCAGCCCCGCGGTATCGCCATCTGGGATTTGGACTGCGGTAGCTTCCTACGGTGAGAAGGGTTGGGCTGGGGAAGTTGAGGATCTCACTACGGATATCTATGTTTTCCTCACTCGGGATGGAACTCAACGAGTCAAGGTAGTTGAACACGGTGGCTGGCCCCAGTGGGTCGACGATCGTACTATTTACTTTCATCGGAGAGGCGATGATCAGTGGTGGAGCATATACAGAGCAATTTTATCCACTGAAGGGCCGGTTTCCACTGAGTCAGTAGTTGTTGAGCGAGTCACTCTACCGGGTCTCCACGCGTTCACACCCGCAACCTCTCCAGGCAACCACAAGTTCATAGCTTTGGCAACGAGGAGACCCAGTTCGAGTTTTCGTCATATAGAGCTATTTGACCTGGTTAAAAAAGAGTTCAAGGAGCTAACTCGCTTGGTCTCGCCTCATAGTCACCACCTTAACCCATTCATCTCTCCTGATTCTACACGGGTCGGGTACCATAAATGCAGAGGAGAACCCAATGGAAAGGAAAGCAGTCCCCAGCTGTTCCTAGAGAACGTTCGAAGCCCAGTACCTGAACTATCTCTTTTCCGGTTCACCGGTTCATTCCCTTCGTTCTCACCCTCAGGCGATCGAATCGTTTATGTTGATATGCCGGGCGTTTATGTTGTAAACAGCGATGGTTCGAACCGGCGTAAAGTTTCTGACGTAATGGCCTTCTCGACTGCATGGGACCGGGTCCGGCCGGGGATTATCTACACCAGTGCCGGACCAACATTTGCTTCGGAGAGTTCAGAAGTTGATGTGATTTCCATCAACGTTGATGACACAGACCAAAATGGTGGCTACAAGATCAAGAGGTTGACCCTGGATGGGAAAAACAACGCTTTCCCTTCGTCCTCGCCCGATGGTAAACGGGTTGTGTTCAGATCGGGTCGTTCGGGTCATAAGAATCTGTATATAATGGACGCTGTTGATGGAGAGAGCGCTGGGCTTCAGAGGTTAACGGAAGGTCCATGGACCGACACGATGTGTAATTGGTCACCGGATGGTGAATGGATTGCTTTTGCATCGGACCGGCGCAATCCGGGTAGCGGGAGCTTCGAGTTGTACCTGATCCACCCGAATGGAACCGGGTTGAGGAAATTGATCCAAAGCGGGTCAGGTGGCCGGACTAACCACCCGTATTTCAGCCGGGATGGGAAGAGTATAGTGTTTACTTCAGACTATGGGGGTATATCAGCTGAGCCAATCTCAAACCCACATCATTACCAGCCATACGGTGAGATTTTCACTATTAAATTGGATGGTTCAGATATAAAGAGGCTAACCCATAATTCTTACGAGGATGGCACACCTGCCTGGTCCCCAAAATTTATCAAGCCTGTTAGTGTTGAGGAGTCAAAGAATGGGCCCTATTGTTACTTTGAAGATTGTCATTGGCTCAATGAATTGCCAGATAGTGGCCACTCCAAGATTCAGTGTGGTGTGTA 2120 0.4849 MKVSISLFLLLLLRFLTSLSILAAEHDASSIIFTTLGRSYYAFDIYSLSTLEPPKANSEIRITDGQSVNFNGQFPSPSSSSFLLSLLPNTTGIRVSTDPPPLHLVYVTERNGVSNIYCDAVYYDDSRITRRRSALEFITDRVQIPLLTNQLRENRVSMKDKPSLTGEHLIYVSTHENPGVPRASWAAVYSTHLKSGLTRRLTPYGVADFSPAVSPSGIWTAVASYGEKGWAGEVEDLTTDIYVFLTRDGTQRVKVVEHGGWPQWVDDRTIYFHRRGDDQWWSIYRAILSTEGPVSTESVVVERVTLPGLHAFTPATSPGNHKFIALATRRPSSSFRHIELFDLVKKEFKELTRLVSPHSHHLNPFISPDSTRVGYHKCRGEPNGKESSPQLFLENVRSPVPELSLFRFTGSFPSFSPSGDRIVYVDMPGVYVVNSDGSNRRKVSDVMAFSTAWDRVRPGIIYTSAGPTFASESSEVDVISINVDDTDQNGGYKIKRLTLDGKNNAFPSSSPDGKRVVFRSGRSGHKNLYIMDAVDGESAGLQRLTEGPWTDTMCNWSPDGEWIAFASDRRNPGSGSFELYLIHPNGTGLRKLIQSGSGGRTNHPYFSRDGKSIVFTSDYGGISAEPISNPHHYQPYGEIFTIKLDGSDIKRLTHNSYEDGTPAWSPKFIKPVSVEESKNGPYCYFEDCHWLNELPDSGHSKIQCGV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02067 706 Pfam WD40-like Beta Propeller Repeat 542 580 IPR011659 -
Bva12g02067 706 Pfam WD40-like Beta Propeller Repeat 601 618 IPR011659 -
Bva12g02067 706 Pfam WD40-like Beta Propeller Repeat 495 530 IPR011659 -
Bva12g02067 706 SUPERFAMILY Tricorn protease N-terminal domain 314 568 - -
Bva12g02067 706 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 29 687 - -
Bva12g02067 706 SUPERFAMILY Tricorn protease N-terminal domain 535 667 - -
Bva12g02067 706 Gene3D - 574 678 IPR011042 -
Bva12g02067 706 Gene3D - 409 573 IPR011042 -
Bva12g02067 706 Gene3D - 161 397 IPR011042 -
Bva12g02067 706 SUPERFAMILY Tricorn protease N-terminal domain 163 318 - -
Bva12g02067 706 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 29 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02067 Bva-Chr12 16180347 16182728 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02067 - - aprc:113853220 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02067 12 16180347 16182728 Bva12g02067 12 16180347 16182728 ECH