Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02065 ATGGTTGAGAACGGTGCCGCCAACAAGAACCATCAAGCATTTGATGTCTCCATAGACGTGTTTCAACAAAGAGACTCTAAGTTCTTCGACGACGATGACCGCCCCAAAAGAACTGGGACTGTGTGGACTGCGAGTGCCCACATCATAACAGCTGTAATTGGTTCTGGTGTGCTATCTCTGGCATGGGCTATAGCTCAGCTTGGATGGATTGCTGGTCCTGCTGTGATGATTCTGTTCTCTTTTGTGACTTATTACACTTCCACCCTTCTCTCTGTTTGCTACCGTACTGGTGACCCTGTCAATGGCAAGAGGAATTACACTTATATGGATGCTATTCGATCAAACCTTGGCGGCTTGAAGGTTAAGCTCTGTGGGCTGGTTCAATATGTTAACCTTTTCGGAGTTGCCATTGGTTACACTATTGCATCTGCCATAAGCATGATGGCAATCAAAAGGTCCAACTGTTTTCACAGTAGTGGTGGCAAAGATCCATGCCATATGAATAGCAACGTTTACATGATTGCATTTGGTATCACTGAgattattttctctcaaatccCAGACTTCGATCAGTTATGGTGGCTCTCCCTTGTAGCTGCTGTTATGTCTTTCACTTACTCAACAATTGGACTTGGTTTAGGAATTGCCAAAGTTGTAGAAAACGGTAGAATTGGAGGAAGCCTAACTGGGATAAGCGTTGGTACCGTGACAGAAACACAGAAAGTTTGGAGGAGCTTCCAAGCTCTCGGTGACATAGCCTTTGCATACTCATACTCAATGATTCTTATAGAAATTCAGAACACAGTCAGATCTCCACCATCAGAATCAAAAACAATGAAGAAGGCTACTTTTATTAGTGTTGTAGTCACAACCAGTTTCTACATGCTCTGTGGTTGCTTTGGTTATGCTGCTTTTGGAGATGGAAGCCCTGGAAACCTCCTTACTGGTTTTGGTTTCTATAACCCATATTGGCTGCTTGACATAGCCAATGCTGCTATAGTTATCCACCTTGTTGGAGCATACCAAGTTTACTGCCAACCCCTTTTTGCTTTCATTGAAAAAGCAGCAGCAAATAGATTCCCAGACAGTGATTTTGTgaacaaagaaattgaagtaCCAATCCCAGGTTACCGTAAACTCAACTTCTTCAGACTTATCTGGAGGACAATTTTTGTGATCATTACCACTGTGATATCAATGCTGCTTCCATTCTTCAACGACATTTTGGGGCTTCTTGGAGCTCTTGGGTTTTGGCCTCTAACTGTTTATTTTCCAGTGGAGATGTACATTGTTCAAAAGAGAATCCCAAAGTGGAGCACAAGATGGATCTGCCTCCAATTGCTCAGTATAGCTTGCCTTATAATTACTTTAGCAGCCGCAGCTGGCTCCGTTGCTGGAATTGTCAGTGATCTTGGAAGTTTTAAGCCTTTCCATACCAGCTACTA 1445 0.4221 MVENGAANKNHQAFDVSIDVFQQRDSKFFDDDDRPKRTGTVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMILFSFVTYYTSTLLSVCYRTGDPVNGKRNYTYMDAIRSNLGGLKVKLCGLVQYVNLFGVAIGYTIASAISMMAIKRSNCFHSSGGKDPCHMNSNVYMIAFGITEIIFSQIPDFDQLWWLSLVAAVMSFTYSTIGLGLGIAKVVENGRIGGSLTGISVGTVTETQKVWRSFQALGDIAFAYSYSMILIEIQNTVRSPPSESKTMKKATFISVVVTTSFYMLCGCFGYAAFGDGSPGNLLTGFGFYNPYWLLDIANAAIVIHLVGAYQVYCQPLFAFIEKAAANRFPDSDFVNKEIEVPIPGYRKLNFFRLIWRTIFVIITTVISMLLPFFNDILGLLGALGFWPLTVYFPVEMYIVQKRIPKWSTRWICLQLLSIACLIITLAAAAGSVAGIVSDLGSFKPFHTSY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02065 481 PANTHER OS05G0424000 PROTEIN-RELATED 9 475 - -
Bva12g02065 481 PANTHER AMINO ACID CARRIER 9 475 - -
Bva12g02065 481 Pfam Transmembrane amino acid transporter protein 37 468 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02065 Bva-Chr12 16161853 16164659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02065 9 481 Organic Solute Cotransporters AT1G77380 77.474 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02065 K24917 - twl:119996372 802.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02065 12 16161853 16164659 Bva12g02065 12 16161853 16164659 ECH