Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02063 ATGGCAGTCCCAGTCATCGATTTCTCCAAGGTCAATGGGGAAGAAAGGGCCAAGACCATGGCAGAAATTGCTAATGGCTGTGAAGAATGGGGATTCTTCCAGTTGACCAACCATGGAATTCCAGAGGAGCTCCTTGAGAGGGTGAAGAAGGTTTGCTCTGAGTGTTATAAACTGGAAAGAGAGGAGATTTTCAAGAACTCAACACCGGTGAAGCTACTTAACGAAATAGTTGACAAGAAGAGTGGTGAGAAGTTGGAGAATATTGACTGGGAAGATGTCTTCATTCTGATGGATGATAACGAATGGCCAACAGGAACACCCGGATTCAGGGAAACCATGGCAGAATATCGGTCCGAGTTGAAGAAATTGGCTGAGAAGATAATGGAAGTGATGGATGAGAATTTGGGGTTACCAAAAGGGTACATCAAGAAGGCATTCAATGATGGAGATGGAGACAACGCCTTCTTTGGCACCAAGGTAAGCCACTATCCACCATGTCCCAACCCAGAGCTTGTGGCTAATGGTCTGAGAGCTCACACTGATGCTGGAGGTGTCATCCTACTGTTCCAAGATGATGAGGTGGGTGGCCTTCAAATGCTCAAAGATGGGCAATGGATTGATGTGCAGCCTTTGCGCAACGCTATTGTGATCAACACTGGTGATCAGATTGAGGTGCTAAGCAATGGCAGATACAAGAGCTGTTGGCATCGGGTTCAGGTTAAAACGGATGGTAACAGGAGATCAATTGCTTCTTTCTATAATCCTTCAATGCAAGCCACCATATGTCCTGCACCACAGTTGctggagaaagaaaatcagCAAGTGGAGATCACTTACCccaaatttgtttttgctgACTACATGTCAGTCTACGCTGACCAGAAGTTCCTTCCAAAGGAACCAAGGTTTCAAGCCCTTAGAGCCATGTG 929 0.4456 MAVPVIDFSKVNGEERAKTMAEIANGCEEWGFFQLTNHGIPEELLERVKKVCSECYKLEREEIFKNSTPVKLLNEIVDKKSGEKLENIDWEDVFILMDDNEWPTGTPGFRETMAEYRSELKKLAEKIMEVMDENLGLPKGYIKKAFNDGDGDNAFFGTKVSHYPPCPNPELVANGLRAHTDAGGVILLFQDDEVGGLQMLKDGQWIDVQPLRNAIVINTGDQIEVLSNGRYKSCWHRVQVKTDGNRRSIASFYNPSMQATICPAPQLLEKENQQVEITYPKFVFADYMSVYADQKFLPKEPRFQALRAM 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02063 309 SUPERFAMILY Clavaminate synthase-like 2 302 - -
Bva12g02063 309 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 255 IPR005123 -
Bva12g02063 309 Pfam 2OG-Fe(II) oxygenase superfamily 161 255 IPR044861 -
Bva12g02063 309 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 307 - -
Bva12g02063 309 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 99 IPR026992 -
Bva12g02063 309 Gene3D - 2 309 IPR027443 -
Bva12g02063 309 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 307 - -
Bva12g02063 309 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02063 Bva-Chr12 16145279 16146492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02063 1 272 Glycosyltransferase AT5G59530 30.634 1.52e-38 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02063 K05933 - gmx:100796909 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02063 12 16145279 16146492 Bva12g02063 12 16145279 16146492 ECH