Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02053 ATGGCTTCCGATGTGGGATCCACCACAGACAAGCTCTCTCAACTCGGCATCAATGGCAATTTCACATCTTCTGCCCCCAACCTTCAGAAAAATCTCCACCTTCTGTCGCCAGAAGAGATTGAACTTGCGAAGATGTTGTTGGACTTGGCGCAAGGTCACCTCTTCGAAAATTGGGCAGAGCCGGGTGTTGATGATGATCAAAAGAAAGGTTTTTTTGAGCAGGTGGCTCGATTACATTCTAGCTACCCTAATGGGTTGGCGTCATATGTCAAAAATGCCAGAGTACTCTTGGCTGATTCAAAAGCTGGAAAGAACCCGTATGATGGTTTTACACCTTCTGTTCCAAGTGGTGAGACTTTAACATTTGGTGATGATAACTTCATCAAATTTGAGGAGGCAGGTGTGAAGGAAGCACGGAGAGCCGCATTTGTTCTCGTGGCAGGTGGCCTTGGGGAACGTCTAGGATACAATGGTATTAAGGTTGCTCTTCCAGCAGAAACCACTACTGGGACATGTTTCTTAAAGCTTTACATTGAATCTATATTGGCTCTTCAACAAGCCAGCTGTGAATCCTCACAAGgtGATTGCGAGACAGAGATTCCTTTTGTTATTATGACGTCTGATGACACACATTCACTTACTTCAGAGCTTTTAGaatcaaattcttattttggCATGCAACCCTCACAAGTAATACTTTTAAAGCAGGAAAAAGTAGCATGTTTAGACGATAATGATGCCAGGCTTGCTGTGGATCCACAAAACAAATACAGAATTCAGACAAAACCTCATGGCCATGGTGATGTACATTCACTTCTCTATTCCAGTGGCCTTCTGCATGTATGGCGCGATTCTGGTTTGAAATGGGTTCTTTTTTTCCAAGATACAAACGGACTTCTATTCAAGGCAATTCCAGCAGCACTAGGTGTTAGTGCTACCAAAGAGTACCATGTTAACTCTCTTGCTGTACCTCGGAAAGCAAAAGAGGCTATTGGAGGAATTACCAGACTCACTCACTCTGATGGGAGGACAATGGTGATAAATGTGGAATACAATCAGCTAGATCCTCTCCTTAGAGCAACTGGACACCCTGATGGTGATGCCAATTGTGAGACTGGATACTCTCCCTTTCCAGGAAACATAAACCAATTGATTTTGGAACTTGGTCCATACATTGAACAGCTCACAGAAACAGGAAGTGCCATAAAGGAGTTCGTTAACCCAAAATATAAAGACGCCAGCAAGACTTCATTTAAGTCTTCAACTCGACTTGAGTGTATGATGCAAGACTATCCTAAAACATTACCCCCATCTGCGAGGGTTGGATTTACGGTAATGGACGGATGGCTTGCTTATGCACCTGTCAAGAACAACCCTGAGGATGCTGCTAAGGTACCGAAAGGAAATCCATACCACAGTGCAACCTCTGGAGAAATGGCAATCTACAGAGCAAACAGCCTTATTCTTAAAAAGGTTGGTGTCCAAGTACCAGAACCAGTATTGCAGGTTTTCAATGGGCAGGAGGTGGAAGTTTGGCCCCGTATCACATGGAAGCCAAAATGGGGCCTGACCTATTCTCGGATTAAGAGCAAAGTCAGAGGAAACTCCTCCATATCTCAGAGCTCTACATTGGCCATTAATGGTCAACGGATCATTCTTGAGGATTTGTCCTTGGATGGGACCCTCATCATTCATGCTATTGATAATGCAGAGGTAAAAGTGGGTGGTTCTGTTCAAAACAAGGGTTGGACCCTCGAAAATGTAGACTGCAAGGATAACTCAGAACCCGAGGTATTAAGATTAAGGGgttttaaattcaacaaaattgaGCAGCTGGAAGAGAAGTACTCTGAGCCTGGCAACTTTAGCTTGAAGAAACCTTG 1883 0.4328 MASDVGSTTDKLSQLGINGNFTSSAPNLQKNLHLLSPEEIELAKMLLDLAQGHLFENWAEPGVDDDQKKGFFEQVARLHSSYPNGLASYVKNARVLLADSKAGKNPYDGFTPSVPSGETLTFGDDNFIKFEEAGVKEARRAAFVLVAGGLGERLGYNGIKVALPAETTTGTCFLKLYIESILALQQASCESSQGDCETEIPFVIMTSDDTHSLTSELLESNSYFGMQPSQVILLKQEKVACLDDNDARLAVDPQNKYRIQTKPHGHGDVHSLLYSSGLLHVWRDSGLKWVLFFQDTNGLLFKAIPAALGVSATKEYHVNSLAVPRKAKEAIGGITRLTHSDGRTMVINVEYNQLDPLLRATGHPDGDANCETGYSPFPGNINQLILELGPYIEQLTETGSAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGFTVMDGWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILKKVGVQVPEPVLQVFNGQEVEVWPRITWKPKWGLTYSRIKSKVRGNSSISQSSTLAINGQRIILEDLSLDGTLIIHAIDNAEVKVGGSVQNKGWTLENVDCKDNSEPEVLRLRGFKFNKIEQLEEKYSEPGNFSLKKP 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02053 627 CDD UGGPase 141 459 - -
Bva12g02053 627 PANTHER UDP-SUGAR PYROPHOSPHORYLASE 26 602 - -
Bva12g02053 627 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 26 602 IPR039741 -
Bva12g02053 627 Pfam UTP--glucose-1-phosphate uridylyltransferase 135 290 IPR002618 GO:0070569
Bva12g02053 627 SUPERFAMILY Nucleotide-diphospho-sugar transferases 40 566 IPR029044 -
Bva12g02053 627 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 36 493 IPR029044 -
Bva12g02053 627 Gene3D - 494 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02053 Bva-Chr12 16078188 16084789 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02053 K12447 - zju:107421126 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02053 12 16078188 16084789 Bva12g02053 12 16078188 16084789 ECH