Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02048 ATGAAACTGACatggaagaagaacaagaagcgTCCTTTACCCGCAGTGAATAACCTCCCTTTTGAGAATCACCAAGACGACAACGTTTCTCAGACAGACGAATCTCACACTCATACACACCTCAACAACAACGATCCTACTCAAGTTCGCAACACCGACCAACATTCAGACCTGCCGGTGCCGGATGCAACATATCTCTCTAAGCAATTTCAAGCTGAAGGAGACAAACTTGCTGAGGAGGGGAACTACCGGGAAGCATTGGGCAAATGGGAGACTGCTATTACTTTGACACCCGAAGTTGCAGCTTTACATGAACAGAAGGCCCAAGTTTTATTGGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAACTCGAGCTACTGAATTGGAGCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAGCACAGCTGAATTTTGGTGAGCCTGATAGCGCTATTGAAAGCTTTGACAGAGCCTTAGCTGTAAAGCCTGATAGTGAGGAAGCTCGAGATGATAGGAAAACTTCATTACATCttgtgaagaagagaaaacagcTTCAGTCATCGGGCTTGAGCGTCTCTAACAATCGTTACGCGGTAGGCGATAAGAGTGGAGACTCGTG 629 0.4404 MKLTWKKNKKRPLPAVNNLPFENHQDDNVSQTDESHTHTHLNNNDPTQVRNTDQHSDLPVPDATYLSKQFQAEGDKLAEEGNYREALGKWETAITLTPEVAALHEQKAQVLLEIGDAWNALKAATRATELEPSWAEAWVTLGRAQLNFGEPDSAIESFDRALAVKPDSEEARDDRKTSLHLVKKRKQLQSSGLSVSNNRYAVGDKSGDS 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02048 209 Gene3D Tetratricopeptide repeat domain 64 198 IPR011990 GO:0005515
Bva12g02048 209 MobiDBLite consensus disorder prediction 184 203 - -
Bva12g02048 209 ProSiteProfiles TPR repeat region circular profile. 135 167 - -
Bva12g02048 209 MobiDBLite consensus disorder prediction 165 209 - -
Bva12g02048 209 SUPERFAMILY TPR-like 70 186 IPR011990 GO:0005515
Bva12g02048 209 Pfam Tetratricopeptide repeat 107 168 - -
Bva12g02048 209 SMART tpr_5 67 100 IPR019734 GO:0005515
Bva12g02048 209 SMART tpr_5 101 134 IPR019734 GO:0005515
Bva12g02048 209 SMART tpr_5 135 168 IPR019734 GO:0005515
Bva12g02048 209 PANTHER OSMOSIS RESPONSIVE FACTOR 1 206 - -
Bva12g02048 209 ProSiteProfiles TPR repeat profile. 135 168 IPR019734 GO:0005515
Bva12g02048 209 MobiDBLite consensus disorder prediction 165 180 - -
Bva12g02048 209 MobiDBLite consensus disorder prediction 41 58 - -
Bva12g02048 209 MobiDBLite consensus disorder prediction 1 61 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02048 74 179 EF-hand Containing Proteins AT2G32450 33.019 1.09e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02048 - - pavi:110766390 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02048 12 16055442 16058900 Bva12g02048 12 16055442 16058900 ECH