Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02046 ATGGATTCCATTGTTGCCTCTGCACTGAATATGGGGGGAACTAGTTCTTTCTTCGACTCATCGTTGCTTCAGAAGCAACAGTGCGTGCCCATGAGTTTCATTTGGCCGGAAGAGTCCATAGCTGAAGCTCATCAAGAGCTCCAAGCACCAGTTGTGGACCTTGCTGGGTTCCTCAGAGGAGATGAACAGGCCACCAAACGTGCTGCTAAGCTCGTCAGAGAAGCCTGCGTAGCCCATGGCTTCTTCCAAGTGATCAACCATGGCGTTGATTCACAACTCATTCTGGAAGCATACGACCAAATGGACACCTTCTTTAAACTACCAGTTCACGAAAAATTAAGGGTTCGTAAGACAAGCCAATCCATGTGGGGGTATTCTGGTGCCCATGCTGGTCGATTCTCCTCCAAACTACCTTGGAAGGAGACTCTCTCTTTCCCCTACCATGACAATATCCCGGAGCCTATTGTGACGAACTACTTTAACTCAACCTTGGGCAAAGATTTCGAACTAACTGGAATGGTGTTTCAGAAGTACTGCAGAGCTATGAAGGAGTTAGGGCTGAAACTGATGGAGCTGTTGGGAATCAGCTTAGGTGTGGAGAGGTTGCATTACAAGAACTTTTTCGAAGATGGTTGCTCCATTATGAGATGCAACTATTACCCATCTTGCCAACAACCAAGCCTTGCCCTTGGAACAGGACCACACTGTGACCCAACCTCCTTAACTATACTTCACCAAGATCAAGTCGGTGGTCTTCATGTGTTTTCAGACGAGAATTGGCACACAATTCGACCTCGTCCTGATGCCCTTGTAATCAACATTGGTGATACCTTCACGGCACTATCAAATGGGAGATACAAGAGTTGCCTGCATAGGGCAGTGGTTAACAGGTACAAGGAGAGGAGGTCCTTGGCATTCTTTCTGTGCCCAAAAAAAGACAAGGTGGTGAGACCCCCAGAGGATATATTGCTCAGGGAAGGGACAAGAAAGTACCCGGATTTCACATGGTCGGATTTGCTTGAATTCACACAAAAGTACTACAGAGCCGACGAAGCTACCCTGCAAAATTTCACCAAGTGGCTGCTATCCTCCAAACTGCAAACGTTTTA 1109 0.4716 MDSIVASALNMGGTSSFFDSSLLQKQQCVPMSFIWPEESIAEAHQELQAPVVDLAGFLRGDEQATKRAAKLVREACVAHGFFQVINHGVDSQLILEAYDQMDTFFKLPVHEKLRVRKTSQSMWGYSGAHAGRFSSKLPWKETLSFPYHDNIPEPIVTNYFNSTLGKDFELTGMVFQKYCRAMKELGLKLMELLGISLGVERLHYKNFFEDGCSIMRCNYYPSCQQPSLALGTGPHCDPTSLTILHQDQVGGLHVFSDENWHTIRPRPDALVINIGDTFTALSNGRYKSCLHRAVVNRYKERRSLAFFLCPKKDKVVRPPEDILLREGTRKYPDFTWSDLLEFTQKYYRADEATLQNFTKWLLSSKLQTF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02046 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 210 310 IPR005123 -
Bva12g02046 369 PRINTS Isopenicillin N synthase signature 235 256 - -
Bva12g02046 369 PRINTS Isopenicillin N synthase signature 72 89 - -
Bva12g02046 369 PRINTS Isopenicillin N synthase signature 270 296 - -
Bva12g02046 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 50 150 IPR026992 -
Bva12g02046 369 Pfam 2OG-Fe(II) oxygenase superfamily 213 310 IPR044861 -
Bva12g02046 369 Gene3D - 20 348 IPR027443 -
Bva12g02046 369 PANTHER GIBBERELLIN 20-OXIDASE 11 364 - -
Bva12g02046 369 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 11 364 - -
Bva12g02046 369 SUPERFAMILY Clavaminate synthase-like 22 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02046 Bva-Chr12 16034801 16037258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g02046 13 348 Glycosyltransferase AT5G59530 28.080 3.60e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02046 K05282 - gmx:100801187 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02046 12 16034801 16037258 Bva12g02046 12 16034801 16037258 ECH