Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g02041 ATGGCTAATAATGCAGCAGCCTGTGCTGAGAGGGCGACTAGTGACATGCTGATTGGTCCAGACTGGGCAATTAACATAGAGTTGTGTGATCTCATTAATATGGACCCAAGgcaAGCAAAGGATGCATTGAAGATACTTAAGAAGCGTTTGGGCagtaaaaatccaaaaatacaACTTTTGGCTCTTTTCGCATTGGAGACCCTCAGCAAAAATTGTGGCGAAAATGTTTTTCAGCAGATCATTGAGCGGGATATATTACATGAGATGGTTAAGATAGTGAAGAAGAAGCCGGACTTAAATGTGAGGGAAAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGAGGTCCAAGTGGAAGATATCCGCAGTACTATGCAGCATATAATGAACTAAAGTCCTATGGAGTTGAATTTCCACCACGAGAGGAGAGTAGTGTACCATTCTTCACCCCACCTCAAACCCAACCAATTGAACATGCTACTGCAGCATATGATGATGCTGCTATTCAGGCTTCTCTCCAGTCAGATGCTTCTGGCCTTAGTTTGTCAGAGATTCAAAATGCTCAAGGATTAGCGGATGTATTGATGGAAATGCTTGGTGCCTTGGATCCTAAAAACCCTGAGggtGTGAAGGAAGACGTGATTGTTGATCTTGTTGACCAGTGCCATTCTTATCAAAAGCGTGTCATGCTTCTGGTGAACAATACTGcGGATGAGGAGCTTTTATGTCAAGGATTGGCACTGAATGACAGCCTGCAGCGAGTCCTTCGTCGACATGATGATATTGTAATAGGGACTCCTAACCCAGTTGCAAGAGAAACGGAAACTACTGCTCTGCCGCTTGTGAACGTAAACCAGGAGGATGATGAGTCAGAAGATGATTTTGGACAGTTAGCTCACAGGTCATCAAGAGATAATCATGCACAGAATCGGAAACCACCCAATGACAAGGCAGAACCATTTCTTCCTCCTCCACCAGCATCAAGGAAGCCTGTCTACACTGACACTGGGACGGTTGACTATCTCAGTGGTGATGTGTACAAAGCAGAAGGGGCCTCTGAGAACTCAAAACAGACATCGTTTACTGTTCCACTTCATTCTAGTCCAAATCCTACCTTGTCTTCCTCACCTCCTCCTCATGGCGTGGATACCAGACAACCTGTTTATGACGAACCGTCTCCCATGAACAAATCTTCAGAAAGCCTGCCTCCAGCTCCCTGGGACACACAAGTTGCCGGCATCCTTCCACCTCCACCTTCAAGACATAATCAAAGGCAACAGTATTTTGAGCAGCAAGGTACATCACTTTCAAGTAGTGGATCTTCCTCTTATGATAGCATGGTGGAACAAACTCGGAATATATCCCTCAATTCGTCTACCCCAACCAAACAAGAGAAGCCAGAAGATGCCCTCTTCAAAGATCTAGTTGATTTTGCAAAATCCAAGACCTCTTCATCTTCCAAACCCAATCGTTCCTATTG 1487 0.4385 MANNAAACAERATSDMLIGPDWAINIELCDLINMDPRQAKDALKILKKRLGSKNPKIQLLALFALETLSKNCGENVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPSGRYPQYYAAYNELKSYGVEFPPREESSVPFFTPPQTQPIEHATAAYDDAAIQASLQSDASGLSLSEIQNAQGLADVLMEMLGALDPKNPEGVKEDVIVDLVDQCHSYQKRVMLLVNNTADEELLCQGLALNDSLQRVLRRHDDIVIGTPNPVARETETTALPLVNVNQEDDESEDDFGQLAHRSSRDNHAQNRKPPNDKAEPFLPPPPASRKPVYTDTGTVDYLSGDVYKAEGASENSKQTSFTVPLHSSPNPTLSSSPPPHGVDTRQPVYDEPSPMNKSSESLPPAPWDTQVAGILPPPPSRHNQRQQYFEQQGTSLSSSGSSSYDSMVEQTRNISLNSSTPTKQEKPEDALFKDLVDFAKSKTSSSSKPNRSY 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g02041 495 MobiDBLite consensus disorder prediction 276 338 - -
Bva12g02041 495 MobiDBLite consensus disorder prediction 296 316 - -
Bva12g02041 495 SUPERFAMILY GAT-like domain 144 265 - -
Bva12g02041 495 PIRSF TOM1 1 494 IPR014645 -
Bva12g02041 495 PANTHER TOM1-LIKE PROTEIN 4 1 494 - -
Bva12g02041 495 CDD VHS 10 135 - -
Bva12g02041 495 Pfam GAT domain 193 265 IPR004152 GO:0035091|GO:0043130
Bva12g02041 495 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Bva12g02041 495 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Bva12g02041 495 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Bva12g02041 495 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
Bva12g02041 495 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Bva12g02041 495 MobiDBLite consensus disorder prediction 393 407 - -
Bva12g02041 495 PANTHER TOM1-LIKE PROTEIN 1 494 IPR044836 GO:0035091|GO:0043130|GO:0043328
Bva12g02041 495 MobiDBLite consensus disorder prediction 354 372 - -
Bva12g02041 495 Gene3D - 174 270 IPR038425 -
Bva12g02041 495 MobiDBLite consensus disorder prediction 422 467 - -
Bva12g02041 495 Gene3D - 2 158 IPR008942 -
Bva12g02041 495 MobiDBLite consensus disorder prediction 353 473 - -
Bva12g02041 495 CDD GAT_GGA_like_plant 186 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g02041 Bva-Chr12 16012598 16017515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g02041 - - gmx:100792343 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g02041 12 16012598 16017515 Bva12g02041 12 16012598 16017515 ECH