Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01998 ATGCATCTTGTCGACTTTGCTCTTGAAATGAAGAGCAAGATCGGGGAAAGCAAAGAACACAGCGCTACAAGCATGCATGCAGAGAGAAAACCGAAGAATAAGGGATCTAGCAACCGGCTTTCCGCCATGGTTTACCGATCCCGAATTCCAACTCTCCTGATCTCCATGTTCGCTACTTTTGCTTCAATCTACGTCGCTGGAAGGTTATGGCAGGACGCAGAGAACAGGGTTTATATGATAAAAGAGCTCGATAGGATAACTGGGCAGGGACAATCTGCTATATCAGTGGATGACACATTGAAGATCATAGCCTGCAGGGAACAGCATAAGAAGCTGGATGCTCTTGAGATGGAACTAGCTGCAGCTAGACAAGAGGGCTTTGTTTCAAAGCGCTTGACAGAGACAAATGGGACTTATTCTAAGAGAAGGCCATTAGTAGTCATAGGTATACTTACAAGATTTGGCCGCCAGAACAATAGAGATGCAATCCGTAAGGCATGGATGGGGAGTGGTGCAActttgaagaaaatggaagatggGAAGGGCATAATTGCTCGATTTGTTATTGGGAGAAGTGCAAATCGTGGGGACCATCTGGACAGGGAAATTGATCATGAAAATAGGCAGAATAATGACTTCATAATTCTTGATAATCATTTGGAGGCAAATGAAGAGCTCCCCAAGAAGGCCAAGTTGTTTTTTGCTTACGCTGTTGACAAATGGGATGCTGAATTTTTTGCTAAAGTCAACGATGATGTTTATGTAAATATTGATACATTGGGAGCCACACTCGCAACTCATTTGGACAAACCTCGTCTTTACATGGGTTGTATGAAATCAGGCGAAGTTTTCTCTGAACCGAACCATAAATGGTACGAGCCAGAATGGTGGAAGTTTGGTGACAAAAAATCATATTTCCGTCATGCTTCTGGCGAGATGTATGTCATATCAAGAGCTTTGGCgaaatttatatcaataaataaAAATATTCTTCGCACCTACGCCCATGATGACGTTAGTGCTGGATCCTGGTTCGTCGGGCTTGATGTCAAGCATGTTGATGAGGGCAAGTTTTGTTGCTCCTCTTGGTCAGCAGGAGCAATTTGTGCTGGTGTTTG 1118 0.4249 MHLVDFALEMKSKIGESKEHSATSMHAERKPKNKGSSNRLSAMVYRSRIPTLLISMFATFASIYVAGRLWQDAENRVYMIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALEMELAAARQEGFVSKRLTETNGTYSKRRPLVVIGILTRFGRQNNRDAIRKAWMGSGATLKKMEDGKGIIARFVIGRSANRGDHLDREIDHENRQNNDFIILDNHLEANEELPKKAKLFFAYAVDKWDAEFFAKVNDDVYVNIDTLGATLATHLDKPRLYMGCMKSGEVFSEPNHKWYEPEWWKFGDKKSYFRHASGEMYVISRALAKFISINKNILRTYAHDDVSAGSWFVGLDVKHVDEGKFCCSSWSAGAICAGV 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01998 372 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 33 366 - -
Bva12g01998 372 Pfam Domain of unknown function (DUF4094) 48 124 IPR025298 -
Bva12g01998 372 MobiDBLite consensus disorder prediction 16 39 - -
Bva12g01998 372 MobiDBLite consensus disorder prediction 16 35 - -
Bva12g01998 372 Gene3D - 139 363 - -
Bva12g01998 372 Coils Coil 105 125 - -
Bva12g01998 372 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 33 366 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bva12g01998 372 Pfam Galactosyltransferase 159 354 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01998 Bva-Chr12 15806912 15812411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01998 51 372 Glycosyltransferase AT5G53340 73.292 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01998 K20854 - gmx:100779561 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01998 12 15806912 15812411 Bva12g01998 12 15806912 15812411 ECH