Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01996 ATGAAGTTGCAATTTGGAGCAATGGGTCAGATAATTCGTGAAAGGGCAGCATATTTTGCTGCTCTGTTCTTCCATATAACACTGCAGAAGAGTCACAGCATCCAAATCCAAATGGTTCGAGAAAAAGATGTCTGTTGGGAATATGCAGAGAAATTAGATGGAAACAAGGTAAAATGCAAATTTTGccaaagaattttaaatggCGGCATCAGTAGATTGAAGCATCATTTATCTCGAGTTCCAAGTAAAGGTGTGAATCCTTGTAGCAAGGTCAGAGATGATGTTACAGACAAAGTACGGGCTATAATAGCGTCAAAGGAAGAGGTGAAGGAAACCTCTACGgtgaaaaagcaaaaacaagaaGTTAGGTCTTTCGGTAATGGTATTGTGTCCAAACCTAAAGCTCTTATATCTATGGATGCAGTATCCTCAGTTATGAAGGTTTTCCCTACTGTCTCTCCTATGGCGTCTCCCTCTATGAACAACCAAGAGAATGCGGAGAAAAATattgctcttttcttttttgagaaTAAGCTAGACTTCAGTGTTGCACGATCTTCATCGTATCAGCTTATGATTGATGCCATAGCCAATTGTGGTCCTGGATTTTCTGGTCCTTCAGCAGAAATGCTGAAGACAACATGGCTGGAAAGGATCAAAACAGAAGTGGGCTTACAATCAAAAGATGTTGAGAAAGAGTGGACAACCACGGGTTGTACTGTCATTGCGGACACATGGACTGACAATAAATCAAGGGCCTTGATTAATTTCTTAGTTTCCTCACCATCCAGGACCTTTTTCCACAAATCTGTGGATGCATCTGCATATTTCAAGAACACAAAATGTCTTGCTGATCTTTTTGATTCTATTATTCAAGAGTTTGGCCCAGAAAATGTCGTACAGATTATCATGGATAGCAGTTTTAACTACACCGGTATTGCCAATCACATTGTCCAGAACTATGGAACCATATTTGTATCTCCCTGTGCCTCTCAATGTTTAAACCTAATCTTAGAGGAATTCTCGAGGGTAGATTGGGTGAGCAGATGCATTTTGCAAGCTCAAACCATATCAAAGTTCATATACAATAATGCTTCATTGCTTGATCTCATGAAGAGGTTCACGGGGGGCCAGGAACTCATCAAGACAGGCATTACGAAATCAGTGTCTAACTTCCTCTCGTTACAGTCAATGTTGAAGCACAGGACAAGATTGAAACATATGTTCCACAGCCCTGAATATGCCTCAAACCCCTCTTATGCAAATAAACCGCAGTCTCTCTCTTGTATTGCAATTGCTGAAGACGGTAATTTCTGCAGGACAGTGGAAGAGTGTGTGGCCATCTCTGAGCCTTTTCTCAAAGTGTTGAGGGAAGTGTCTGAAGGGAAACCAACTGTAGGTTTCATATATGAACTAATGACCAGGGCTAAGGAATCAATTCGGACATACTACATAATGGATGAGAACAAATGCAAGACATTTTTAGATATTGTAGATAAGAAGTGGCGTGACCAACTGCATTCACCTCTACATGCAGCTGCTGCCTTTTTAAACCCTAGTATTCAATATAATcctgaaataaaatttctttcctctaTAAAAGAAGACTTTTATAAGGTTCTGGAGAAATTACTTCCAGTACCTGATATGAGGCGTGACATCACCAATCAAATCTACACTTTTACAAAGGCTCATGGAATGTTCGGTTGTAGTCTAGCAAAGGAGGCAAGAACTACAGTCTCACCATGGCTTTGGTGGGAGCAGTATGGTGATTCTGCGCCTGGGTTGCAACGAGTTGCAATTAGAATATTAAGTCAAGTTTGTAGCACCTTTTCATTTCAGAGGCACTGGAACACATTTCAGCAAATTCACTCTGAGAAACGGAACAAGATTGATAGAGAGACATTGAATGACcttgtttatataaattacaatcTCAAGTTGGCTAAACAAATGAAAGCAAAGCCATTAGAAGTTGATCCACTTCAAGTTGATGATATCGATATGACTTCTGAATGGGTGGAGGAGAGTGAAAATGCCAGTCCTACTCAGTGGCTGGATCGTTTTGGCACTGCCTTAGATGGGAGTGATCTGAATACCAGACAGTTTAGTGCTGCTATATTTGGTGCAAATGACCCAATATTTGGATTGTA 2153 0.3892 MKLQFGAMGQIIRERAAYFAALFFHITLQKSHSIQIQMVREKDVCWEYAEKLDGNKVKCKFCQRILNGGISRLKHHLSRVPSKGVNPCSKVRDDVTDKVRAIIASKEEVKETSTVKKQKQEVRSFGNGIVSKPKALISMDAVSSVMKVFPTVSPMASPSMNNQENAEKNIALFFFENKLDFSVARSSSYQLMIDAIANCGPGFSGPSAEMLKTTWLERIKTEVGLQSKDVEKEWTTTGCTVIADTWTDNKSRALINFLVSSPSRTFFHKSVDASAYFKNTKCLADLFDSIIQEFGPENVVQIIMDSSFNYTGIANHIVQNYGTIFVSPCASQCLNLILEEFSRVDWVSRCILQAQTISKFIYNNASLLDLMKRFTGGQELIKTGITKSVSNFLSLQSMLKHRTRLKHMFHSPEYASNPSYANKPQSLSCIAIAEDGNFCRTVEECVAISEPFLKVLREVSEGKPTVGFIYELMTRAKESIRTYYIMDENKCKTFLDIVDKKWRDQLHSPLHAAAAFLNPSIQYNPEIKFLSSIKEDFYKVLEKLLPVPDMRRDITNQIYTFTKAHGMFGCSLAKEARTTVSPWLWWEQYGDSAPGLQRVAIRILSQVCSTFSFQRHWNTFQQIHSEKRNKIDRETLNDLVYINYNLKLAKQMKAKPLEVDPLQVDDIDMTSEWVEESENASPTQWLDRFGTALDGSDLNTRQFSAAIFGANDPIFGL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01996 717 PANTHER OSJNBA0013A04.12 PROTEIN 39 711 - -
Bva12g01996 717 Pfam BED zinc finger 44 79 IPR003656 GO:0003677
Bva12g01996 717 ProSiteProfiles Zinc finger BED-type profile. 40 95 IPR003656 GO:0003677
Bva12g01996 717 Pfam Protein of unknown function (DUF 659) 206 357 IPR007021 -
Bva12g01996 717 PANTHER HAT TRANSPOSON SUPERFAMILY 39 711 - -
Bva12g01996 717 Pfam hAT family C-terminal dimerisation region 578 646 IPR008906 GO:0046983
Bva12g01996 717 SUPERFAMILY Ribonuclease H-like 229 648 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01996 Bva-Chr12 15800929 15803972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01996 - - adu:107460619 1204.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01996 12 15800929 15803972 Bva12g01996 12 15800929 15803972 ECH