Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01985 ATGGGATCCAAACAGGGCATATGTTCGCACGCAGAGGACCCAGAATTGAAGGATTTAATGGACTACATTGACTCTCTCAAGAACTATGAGAAATCAGGCGTGCCCAAAGGGGCGGGTACTGATACCCGCCAAGGCTTTGACCTAGGTAGAATGACCCGCCTAATGCAGCGGTTCGATAATCCTCAGTCTAAGTTCAAGGCTGTTCATGTTGCTGGGACAAAGGGCAAGGGATCAACGGCtgcttttgtttataatatcCTAAGGCGACAAGGCTATTCTGTTGGTTGTTACACTAGTCCACATATACGTACTATCAGGGAACGCATATTACTGGGAAGATACGGTGATCAAGTGTCggcaaaaaaattgaataatcttTTCCATGGGATCAAGCAGACTCTCGACCAAGCAATGATTGAAGAAAAGGGTTGCATTAGCCATTTTGAGGTTTTTACAACCATGGCTTTCATCCTATTTGCTGAGGAGAACATTGACGTTGCAGTTATTGAGGCTGGTCTGGGGGGTGCACGAGATGCAACAAATATTATCTCTAGCTCTGGACTTGCTGCATCTGTCATAACCACCGTAGGCAAGGAACATTTGGCTGCTCTTGGAGGTTCTTTGGAAACTATAGCAATGGCAAAGTCAGGAATTATAAAACAAGGCCGCCCATTGGTACTGGGTGGGCCATTTCTCCCTCATATTGAGCTCATTATTCGTGACAAAGCAGCATCCATGGGTTCGCCTGTAGTATCAGCATCTGATCCTGGGAATAGATTTACCATAAGAAGTGTCAGCATGCTCGATGGTAGACCTTATCAATCTTGTGATATAGCAATACAAGTTGAGAAAGATTTAAAACTGTCATGTGAATTACTTGATGTGAAGCTGCGCATGATTGGATACCACCAACTCCAAAATGCAGCAACTGCCACTTGTGTATCACTCTGTCTTCGTAATTTAGGATGGAGAATTTCAGATGAATCTATCAGAACCGGTTTAGAAGATACATACCTCCTTGGAAGGAGTCAGTTCCTTGCACCCAGAGAATCTGAGTTATTAGGACTTGCTGGAACAACAATATTGCTGGATGGAGCCCATACCAAAGAATCTGCCAAAGCACTGATGAACACAATAAGGTTGACATTTCCAGAAGCTCGATTGGCTTTTCTTGTTGCAATGGCAAGTGACAAAGATCATGTAGGCTTTGCTAGAGAAATTCTATCAGGAGGACCAGTGGAGGCTGTTGTTTTAACAGAAGCTGCTATTGCTGGAGGTGTAACTCGGTCGACTTCAGCTTCCTTGTTGAGGGATTCTTGGATTCAAGCTTCTGAGGAACTCGGTATGTGTATTGTTCATAATGAAATGCCAGAATGCAGAGACTTGTCAAGGAATCAACCAGTATGCTCTATAAGAAATAGAGATGACGGTAGAACTATATTGGCTACCGAGGCTTCTTTGAGTGTTTCTTTGAAAACCATAGATCAGATTCTCAGAAGGAAAGGGGATGAGACATGTATTATTGTCATCACTGGATCTCTGCATATTGTTTCATCGATTTTAGCTTCTCTCGACAGTTA 1580 0.4259 MGSKQGICSHAEDPELKDLMDYIDSLKNYEKSGVPKGAGTDTRQGFDLGRMTRLMQRFDNPQSKFKAVHVAGTKGKGSTAAFVYNILRRQGYSVGCYTSPHIRTIRERILLGRYGDQVSAKKLNNLFHGIKQTLDQAMIEEKGCISHFEVFTTMAFILFAEENIDVAVIEAGLGGARDATNIISSSGLAASVITTVGKEHLAALGGSLETIAMAKSGIIKQGRPLVLGGPFLPHIELIIRDKAASMGSPVVSASDPGNRFTIRSVSMLDGRPYQSCDIAIQVEKDLKLSCELLDVKLRMIGYHQLQNAATATCVSLCLRNLGWRISDESIRTGLEDTYLLGRSQFLAPRESELLGLAGTTILLDGAHTKESAKALMNTIRLTFPEARLAFLVAMASDKDHVGFAREILSGGPVEAVVLTEAAIAGGVTRSTSASLLRDSWIQASEELGMCIVHNEMPECRDLSRNQPVCSIRNRDDGRTILATEASLSVSLKTIDQILRRKGDETCIIVITGSLHIVSSILASLDS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01985 526 SUPERFAMILY MurD-like peptide ligases, catalytic domain 44 338 IPR036565 GO:0005524|GO:0009058
Bva12g01985 526 ProSitePatterns Folylpolyglutamate synthase signature 2. 168 183 IPR018109 GO:0004326|GO:0005524|GO:0009396
Bva12g01985 526 Gene3D - 342 526 IPR036615 GO:0009058|GO:0016881
Bva12g01985 526 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 352 525 IPR036615 GO:0009058|GO:0016881
Bva12g01985 526 Gene3D - 7 338 IPR036565 GO:0005524|GO:0009058
Bva12g01985 526 Pfam Mur ligase middle domain 70 314 IPR013221 GO:0005524|GO:0009058|GO:0016881
Bva12g01985 526 PANTHER DIHYDROFOLATE SYNTHETASE-RELATED 13 523 - -
Bva12g01985 526 PANTHER FOLYLPOLYGLUTAMATE SYNTHASE-RELATED 13 523 IPR001645 GO:0004326|GO:0005524|GO:0009396
Bva12g01985 526 TIGRFAM folC: bifunctional protein FolC 48 522 IPR001645 GO:0004326|GO:0005524|GO:0009396
Bva12g01985 526 ProSitePatterns Folylpolyglutamate synthase signature 1. 68 91 IPR018109 GO:0004326|GO:0005524|GO:0009396
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01985 Bva-Chr12 15725589 15730492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01985 K20457 - gmx:100816933 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01985 12 15725589 15730492 Bva12g01985 12 15725589 15730492 ECH