Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01976 ATGGGTGGTCCTGAAGGACAAGTCATACCGGATGGCTTCATTCCAAATGGACTCTTGCCTAGTGAAGCAACTTCTGTTGCTCGGGTGCTTGACCGAGACAGATGGTCGCAGGTTGAGAAGAGAACTGCAGAGCTTATTGAACGCATTCAGCCTAACCAACCTTCAGAGGAGCGTAGAAATGCCGTTGCATCATATGTGCAGCGCCTGATCATGAAGTGCTTCTCCTGTCAGGTTTTTACATTTGGATCTGTACCACTGAAGACTTACTTACCTGATGGGGATATTGATCTAACGGCATTCAGCAACAATCAAAATTGGAAGGACAATTGGGCCAGTGAAGTACGAGATATTCTAGAAAGTGAAGAGAAGAGTAAGGATGCTGAATTCCGTGTGAAAGATGTTCAGTATATCCAGGCAGAGGTGAAGATCGTAAAATGCCTAGTGGAAAATATCGTAGTTGACATTTCTATGAATCAGCTTGGTGGTCTATGTACACTTTGTTTTCTTGAGGAGGTTGACAAACTGATAAGCCATAATCATTTATTCAAACGCAgtattatattgataaaagCATGGTGTTACTATGAGAGTCGCATCCTGGGTGCTCACCATGGACTTATTTCAACCTATGCACTGGAAACCTtagtcttatatatatttcatgtttataataatacatttgCTGGACCATTTGAGGTACTGTATCGTTTCCTGGAGTTCTTCAGCAAATTTGACTGGGATAACTATTGCCTTAGCCTGTGGGGACCAGTGCCCATACGTTCACTTCCTCGTATTAGAGCGGAAGCTCCACGAAAGGATTGCGGAGAGTTGTTGCTCAACAGTTTGTTCCTTAATGCTTGTAACTCTGTTTATGCTGTTATGCCTAACAACCAGGAAAATCAGGAGCAGccttttgtttcaaaatattttaatattgtagaTCCTTTGCGTGCAAACAACAATTTGGGGCGTAGCGTCAGTAAGGGTAATTTCTTTAGGATAAGGAGTGCATTTGCTTTTGGGGCTCAGCAGCTAATGAGATTACTGGATTGCCCAGAAGAGAATATAATTGCTGAgttggatttctttttcagaaacaCTTGGGATAGGCATGGGAAAGGCCACCGGCCTGATGCTCCTTATGATCTTTATGcacaaaataaacaagtcaTTGAAAGTTCAACATGTCATGAATCGGAGGTTGGGAAGGCTCAAGAGCCGGAACAGAGGTTTGGAACCTCTGATGTATCTGCTGTTTCTCATACCCAGAGCCAACAGGCTAATGGCACCTCCAATCCTATCATGACCTCTAATTCAAAGCAAACAAGTTCAATGAACACATTTACTGATAGGGGCCAAAATCCTAATTACTCATTAAAGGAAGTTAAAGCCATGCGTCACTTTGCTAGGGCACATTCTAGTCCAGAGTTTGCTCAAATATCTGGTGAATTGTCCCCTCAGCATAGGCATATTGGGACATTGGAAACAGATAGAGGACATGGTCATTCTGGTTCTTCAATAATTGATAATAGTAAGAGATCAAGTTCACGATCTAGGATTTGGGAAAAACAAAGCAACCAAGTTTCAGCTGAAAACCAACAATCTTCATGGCAGACTACTACTTCCGACTGGAGAAGTGATGACGCTGTTGACTCAAAAAATGCTTCAAATAGTTACTATAATTCATTTGGTTTAAAGGACCATTCAGAGATAATGCGGATGCATCAGGAAGAGCAGGATTATTTCAATATGGCTTCACCTTACAATAATCACATTTTCAATGGATATCTCCAAGCACTAGTGAGTTCAAATTCTACTGATCTTCCTTTCCCAGTGCCACCACCTATTATAGCATCAGGTTTCTCTCACGCAAACTCATTTGGTATCCCTCCAGAAAATGGCACTTACTTTGAATACCTTTGGGACCATAATATGCATTACTCTCAAGGTTTAGTTCCATTTGCTGCAACACAATGTTTCCCAAGTGTAGGAATGATGTTGaatcaagaagaaataattgaaCCAGTTGATGATAATTTGGAAGTATCTGAATTGGATCATGAGGATAGCTATGGAGGTTTCTGGTCTGAGCAAGATGTGAATTGTGTGAGAGGGTATGGTTATGAATATGGAAATATCCAAGCTCAATATCTAAGAGATAAGCAAATGTTTGCTTCTGATGATTCCAATTCTAGTAATTCATCCTGGCTGACCGGTTCTTACGGTTACCCATCAAAAGATTTTGGCACAACTATTGAAAACAGATGGTTGACCAGAGAAAATTATGGTGATGATCCACCTGATGAAAGAACTGTAGAAAGTGATGCTAACTCTACTGCAAGTTCTAGATTCGTACCTACTTCCCATTCAACCACACTGTCTTCTGATAGTTCCTCAAATGGACCTTCAACGTTGACTAGGGACCAAAAAGGGGTGAAATCTGCTCATCCTACACAACCATTTGCTCAACGTGAAAATCAGTATGAGGAAAAACTAATTGATTGTGTATCTTCTCAGCCAGATGATAACAGAGAGTGGAATCATCAGTCAACTGTAGACACCAACTTGGCTGAAAGCACTACTGTTGAAACTGTTATTTCTGACGAGACTCATCAATCAACTAGTTATGCACGAGGACCAATTACTGCATCTAATTTAGGGGGTCCTGTCATTCATCCATTTGTAGGTCCTGGTTCAAGGCAGAGAGCTGTTGATGATCAAGGATTAATGCCAATTACATTTTATCCTACTGGACCACCATTTCCATTCTTTACCATGCTCCCATTCCCTACTGAGACAATAACTTCTTATGCAGCCACCAGCCCTAGGGATGTGAATGCAGAGCTAAGTAATCATCACGCACGTCAATCAAATGTTATTTTGGGTTCAACTGTGAGACTTGAACAGTCAGATACTCCCCGTGAGTATAACTCTATCAAGCATGATGCAACTTCAGAGTCTTCTGAAGAACAGAGGTCTGATATTTTGAACAGTGATTTTGCTAGTCATTGGCAGAATCTGCAATATGGGCGGTTTTGTCAGAATGCACAATTACAAGGGCCGTTGCTTTATCCACCCCCTCTTTTTGTACCAGCAACGCATCTACAAGGACAATTTCCATTGAATGGTCCGGGGAGATCATCGGCGAACATAAACATTATGCCCCGTAGGCCACATCCCGTTCCTAGGATGCCAATCCAACGAGCTTATGATAGTCATTTGGGTATTGGTCCGCATTTCCCAACTGAACTTCCTAGATTTCATGGTGGGACTGGAACTTACCTGCCAAATCCTAGGTTTATCAAGAACAGGCATTATAGGAATACCAGAAATCACAGAGAGAGTTACAGCTATGATTGGAGGGATTATAATGGTGAAAGGGAAGGGAATTGGAATTCTAATTCAAAGAGGTCTGGCAACCGAAGCCAATTCCGGTACCAAGTTGAGAGGCAAGGTACAAGGATGGAGAAGACCAATCCAAGCTACAGACGACCTGACAAGTCATGGAATTCGTATAAGAATGGTTCTTTTTCGCCATACAATTCCCATAATAGTTCATTTAATTCTTCAATATCTAACAAACATGTTACTGCCAATGTTCGTCATGGCATGCAATCACTACCAGTTGCTCCTCTTAATGAGATTTCCCCATCTGAATCTGCCGTTCCTCCTGCTGTTATGCTGTATCCATATAATCAAAATGTGAGTTGTGATTCGAACGAGGGGCTTGATTTTGGGTCTCTTGGGCCAGTGCACAGAACAGGCACAAATAAAGCATCACATGAAGGTGAAAGCTCACATGCTGAGGAAGGAGATTCTGAACAGTCTTCACCAGATGACGACTCATCACCCAATTTCAGGAGGGTTTATCAGACTGACGCCCAATCGAGATA 3893 0.4077 MGGPEGQVIPDGFIPNGLLPSEATSVARVLDRDRWSQVEKRTAELIERIQPNQPSEERRNAVASYVQRLIMKCFSCQVFTFGSVPLKTYLPDGDIDLTAFSNNQNWKDNWASEVRDILESEEKSKDAEFRVKDVQYIQAEVKIVKCLVENIVVDISMNQLGGLCTLCFLEEVDKLISHNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVYNNTFAGPFEVLYRFLEFFSKFDWDNYCLSLWGPVPIRSLPRIRAEAPRKDCGELLLNSLFLNACNSVYAVMPNNQENQEQPFVSKYFNIVDPLRANNNLGRSVSKGNFFRIRSAFAFGAQQLMRLLDCPEENIIAELDFFFRNTWDRHGKGHRPDAPYDLYAQNKQVIESSTCHESEVGKAQEPEQRFGTSDVSAVSHTQSQQANGTSNPIMTSNSKQTSSMNTFTDRGQNPNYSLKEVKAMRHFARAHSSPEFAQISGELSPQHRHIGTLETDRGHGHSGSSIIDNSKRSSSRSRIWEKQSNQVSAENQQSSWQTTTSDWRSDDAVDSKNASNSYYNSFGLKDHSEIMRMHQEEQDYFNMASPYNNHIFNGYLQALVSSNSTDLPFPVPPPIIASGFSHANSFGIPPENGTYFEYLWDHNMHYSQGLVPFAATQCFPSVGMMLNQEEIIEPVDDNLEVSELDHEDSYGGFWSEQDVNCVRGYGYEYGNIQAQYLRDKQMFASDDSNSSNSSWLTGSYGYPSKDFGTTIENRWLTRENYGDDPPDERTVESDANSTASSRFVPTSHSTTLSSDSSSNGPSTLTRDQKGVKSAHPTQPFAQRENQYEEKLIDCVSSQPDDNREWNHQSTVDTNLAESTTVETVISDETHQSTSYARGPITASNLGGPVIHPFVGPGSRQRAVDDQGLMPITFYPTGPPFPFFTMLPFPTETITSYAATSPRDVNAELSNHHARQSNVILGSTVRLEQSDTPREYNSIKHDATSESSEEQRSDILNSDFASHWQNLQYGRFCQNAQLQGPLLYPPPLFVPATHLQGQFPLNGPGRSSANINIMPRRPHPVPRMPIQRAYDSHLGIGPHFPTELPRFHGGTGTYLPNPRFIKNRHYRNTRNHRESYSYDWRDYNGEREGNWNSNSKRSGNRSQFRYQVERQGTRMEKTNPSYRRPDKSWNSYKNGSFSPYNSHNSSFNSSISNKHVTANVRHGMQSLPVAPLNEISPSESAVPPAVMLYPYNQNVSCDSNEGLDFGSLGPVHRTGTNKASHEGESSHAEEGDSEQSSPDDDSSPNFRRVYQTDAQSR 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01976 1297 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 412 1288 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 1246 1297 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 1278 1297 - -
Bva12g01976 1297 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 401 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 1127 1149 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 493 551 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 1257 1273 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 973 993 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 1127 1171 - -
Bva12g01976 1297 Gene3D Beta Polymerase, domain 2 51 157 IPR043519 -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 499 551 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 773 813 - -
Bva12g01976 1297 CDD NT_PAP_TUTase 58 165 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 759 827 - -
Bva12g01976 1297 SUPERFAMILY Nucleotidyltransferase 30 200 IPR043519 -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 410 455 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 972 993 - -
Bva12g01976 1297 PANTHER - 412 1288 - -
Bva12g01976 1297 PANTHER - 1 401 - -
Bva12g01976 1297 Gene3D - 158 355 - -
Bva12g01976 1297 SUPERFAMILY PAP/OAS1 substrate-binding domain 181 351 - -
Bva12g01976 1297 MobiDBLite consensus disorder prediction 395 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01976 Bva-Chr12 15650328 15659915 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01976 - - vvi:100248390 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01976 12 15650328 15659915 Bva12g01976 12 15650328 15659915 ECH