Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01970 ATGAGCTTGAAGGTGCTTTCAGCTGGGATGGCAGCGACTCAGAGGACACTTCCTACCCATGCCATTCAAACGGCCGATTTCTCAGTATACTCGTATTCCAACACAAGGAGAAAGTTCATACACTTGAAATATAGTTTTCATTTAAAGCAGCCATTTGATGCTGTTAGGTTATTAGGAAGACATAGGGGGGAACTGTCACCCAGCTCTTCAGCTTTTTCCCTGCCAAATGATAGCAATGGAGGTGAGAGATGCCTTTCAAATGCTAGCACAGATTATCAAATGTTCATTCCTCCAGAAGACAGTGAGAGCTGCAGCAATTCAGATACAGAAGCTTGTGCTTCTCTTTCACAGTCAGGAGAAAACCTATCTTCAAATGCCGGATACCTAGGTGATCATAAACCCCttatagataaaatgaaagcTGTTCACTTACATGTATTAGCCTCAGAACAATGGAATGCATCTATTCTCAAACTATGTCACAGAAACTATGTGGCAAGTGCTACAAACTTAATACATCATCTAGCATTGAAATATTTGGACATTGAGCAGCTAAAGGAAGATGCTTCTTCCATTGGTCTTTGGAATTTGGAGACCATCAATTCATGCATCCTTCCAAGTATTGCTACTAGCATCCAGTTGATGGAGAACAATGCAGGAAATGTCACGCAAAAGACATTACACCAACAAAAGCTTGCAATGATCACTATGCATAATACAATGAGGAAGAAAGTAGTCTCCCATAGAAACATATTATTGGGCTCACTTCAGGAGGAAAAAAGTACACATATCATGGTTACTGTTGGCGATGAAGCTATTAATAGTGATGAACTAATAACAAATATTCTGAAGGCTGGAGCATCTGTTATTCGAATCAATTGTGCCCATGGAAATCCAAGTGTCTGGAACGAGATAATCAATAAAGTTAAACGTAGTTCTCAAATGCTGGAGAAAGCATGTCGCATTCTCATGGATTTAGCTGGACCTAAGCTCCGAACAAGCAAACTGAAGCCCGGTCGATCTGTGATCAAAATATctccaaagaaaaatgctaCTGGAAATGTTATCTCGCCAGCTCAAGTTTGGCTGTCCCATAAGGGAGCAGGCGGCCCACCAAGTCATTTGTCTCCTGATGCAGTTCTGTTCATAGATAACCAAGAATTTCTTAGTGAGCTTAAGGTAGGTGACACTCTGAGATTCCATGATGCAAGAGGAAAGGATAGGAGACTTAAGGTTTCTAGAAGATTTCATATTCTGGGAGGTACTGGCTATATGACGGAGTGTACTAGGACTGCTTATATTGACTCAGAAACAGAATTATGTGTtaagaggaaaaaaggaaaatcgcTCACCGGACAAGTGGTTGATATCCCTGTCAAGGAACCATATATTAGATTGAGGGTTGGGGACTTGTTAGTTATATCACAAGATAGCTCATTTGAAGAGTATGAACCATCTTCAACTACAACGGGTGCTCATTTGATAACTTGCTCGTCAGGCCTTCTATTTGATTCGGTCAAACCAGGAGAGCCCATTGCTTTTGATGATGGAAAGATTTGGGGAGTTATCCAGGGAAAGAGTACTTCAGAGATTGTTGTCTCTATCACTCATGCTGGTCCAAAGGGCACTAAACTTGGATCTCAGAAGTCAATCAACATACCCAATAGCAATATTCGTTTTGAGGGATTCACTTCAAAAGATTTGATGGATCTTGAATTTGTTGCTGCTCATGCGGACATGGTGGGATTGTCATTTGTTCGAGATGTTAATGATATTGTTGTACTTCGCCAAGAATTGGAGCAGCGAAAGCTTGACAACTTGGGAATTGTCCTGAAGATTGAGACTAAGAGtgcatttgaaaatttgccTATGCTGCTATTAGAGGCTATGAAATCCCCCAATCCTTTGGGAGTCATGATTGCTAGGGGAGATCTTGCAGTTGAATGCGGGTGGGAAAGGTTGGCTCATATACAGGAGGAAATTCTATCTATTTGCAGTGCTGCTCATGTACCAGTTATCTGGGCAACGCAGGTCCTTGAGTCACTTGTCAAGTCTGGAGTACCTACCAGAGCTGAGATTACTGATGTGTCTATTGGCAGGAGGGCAAGTTGCATAATGCtgaacaaaggaaaaaatattgtgGAAGCTACTACATTTCTGGACACCGTTCTGCAGAACAGCTCCAAAAAGATGAAAGCAAAGCTGAAGCCGCTTATGCTGAATAACCAAATCTTGTA 2237 0.4005 MSLKVLSAGMAATQRTLPTHAIQTADFSVYSYSNTRRKFIHLKYSFHLKQPFDAVRLLGRHRGELSPSSSAFSLPNDSNGGERCLSNASTDYQMFIPPEDSESCSNSDTEACASLSQSGENLSSNAGYLGDHKPLIDKMKAVHLHVLASEQWNASILKLCHRNYVASATNLIHHLALKYLDIEQLKEDASSIGLWNLETINSCILPSIATSIQLMENNAGNVTQKTLHQQKLAMITMHNTMRKKVVSHRNILLGSLQEEKSTHIMVTVGDEAINSDELITNILKAGASVIRINCAHGNPSVWNEIINKVKRSSQMLEKACRILMDLAGPKLRTSKLKPGRSVIKISPKKNATGNVISPAQVWLSHKGAGGPPSHLSPDAVLFIDNQEFLSELKVGDTLRFHDARGKDRRLKVSRRFHILGGTGYMTECTRTAYIDSETELCVKRKKGKSLTGQVVDIPVKEPYIRLRVGDLLVISQDSSFEEYEPSSTTTGAHLITCSSGLLFDSVKPGEPIAFDDGKIWGVIQGKSTSEIVVSITHAGPKGTKLGSQKSINIPNSNIRFEGFTSKDLMDLEFVAAHADMVGLSFVRDVNDIVVLRQELEQRKLDNLGIVLKIETKSAFENLPMLLLEAMKSPNPLGVMIARGDLAVECGWERLAHIQEEILSICSAAHVPVIWATQVLESLVKSGVPTRAEITDVSIGRRASCIMLNKGKNIVEATTFLDTVLQNSSKKMKAKLKPLMLNNQIL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01970 745 Pfam Pyruvate kinase, barrel domain 464 728 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva12g01970 745 Pfam Pyruvate kinase, barrel domain 260 348 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva12g01970 745 PANTHER PYRUVATE KINASE 99 741 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Bva12g01970 745 SUPERFAMILY PK beta-barrel domain-like 461 558 IPR011037 -
Bva12g01970 745 Gene3D - 527 727 IPR040442 -
Bva12g01970 745 Gene3D - 258 351 IPR040442 -
Bva12g01970 745 PANTHER PLASTIDIAL PYRUVATE KINASE 4, CHLOROPLASTIC 99 741 - -
Bva12g01970 745 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 244 729 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01970 Bva-Chr12 15612036 15615743 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01970 K00873 - tcc:18605731 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01970 12 15612036 15615743 Bva12g01970 12 15612036 15615743 ECH