Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01939 ATGGCTGATGTAACAGATGGCCAATCTCAATGGGAATTCAGCTGCGACCTAGAAGTGGACTATGACTCTGAAGAGAATGCTTCCATGGTATATGCAGCACTAGCTGTTGATAAAGAGTTGCAACCTGACAAAGTGAAAAGAGACATGACAGTTTCTGGTGGAAAGCTTTCAGTGCACTTTGAGGCCATAGAAGCCAGATTTCTTCGGGCATCGTATAGTGCTTTTGTGGATGTTCTCACACTAGCCACAAAAACTATTGAAGAATTAGGTCAAGGAATGGAATTGTG 287 0.4286 MADVTDGQSQWEFSCDLEVDYDSEENASMVYAALAVDKELQPDKVKRDMTVSGGKLSVHFEAIEARFLRASYSAFVDVLTLATKTIEELGQGMEL 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01939 95 Pfam Transcription factor Pcc1 14 87 IPR015419 -
Bva12g01939 95 PANTHER EKC/KEOPS COMPLEX SUBUNIT PCC1 FAMILY MEMBER 6 93 IPR015419 -
Bva12g01939 95 Gene3D - 4 93 - -
Bva12g01939 95 PANTHER GEO08993P1 6 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01939 Bva-Chr12 15419594 15420905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01939 K15902 - jre:108993993 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01939 12 15419594 15420905 Bva12g01939 12 15419594 15420905 ECH