Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01938 ATGCCGTACTGCGACGTCGGAACGCAGCAAGCCACCGCCGATGCGCACCTTAACAATGggattaagattttttatagAACTTACGGTCAAGGACCCACTAAAGTCCTCCTCATCATAGGATTGGCGGGTACACATGACTCGTGGGGCCCACAGATTAAGGGCATGACGGGAACCACCATGCCCAACGAGGATGAAACGGGCACTTCTGATTGGAGTTCATGCAGAGATGACAATGAGAGTGGAGGTGGTATCGAGGTCTGCGCATTTGATAACCGTGGTATGGGTCGGAGCTCCGTACCTACCAGAAAGTCCGATTATACAACCAAGATCATGGCAAAGGATGCAATTGCTTTATTAGATCATCTAGGCTGGAAAAAAGCCCATGTTTTTGGGCACTCAATGGGAGCTATGATAGCATGTAAACTAGCGGCAATGGTGCCTGACAGAGTTCTCTCTTTAGCATTGCTCAATGTAACCGGTGGAGGCTTTCAATGCTTTCCGAAGTTTGATCGACAAACATTCTCCATTGCTTATCGTTTCTTGAAAGCAAAAACTCCTGAACAAAGGGCTGCTGTTGACTTGGACACCCACTATTCAAAGGAATATCTTGAGGAATATGTTGGAACCGACAAGAGGAGAACAATCTTATATCAgCAATATGTAAAGGGTATATCAGCAACTGGGATGCAATCTAGTTATGGTTTTGAGGGTCAAGTCAATGCATGTTGGACGCATAAAATGACAAGAACAGAAATTGATTTGATCAGATCTGCTGGTTTTCTTATTTCCGTCATTCATGGCAGGTATGATATAATTGCTCAAATATATTATGCAAGAAGACTTGCAGAGAGGCTGCACCCAGTGGCTAGAATGGTAGATCTTCATGGAGGACATCTAGTGAGTCATGAGAGGACTGAAGAGGTCAACCAGGCTCTTTTTGACTTGATCAAGGCATCAGAAGTGAAGATGAGCCCACATGATTGGACTAATTTTCCAAAGAGCAACCCTTTGTGGACAGAGAAAAGGGAGTTATATTTCAGATCAACCAGAGAAGAAGCTCAAAACCAGCTAGAGTTGAAGCTTCCCCCTTATATACTGATGCTCaataacccttttttttttaatctacaGGTGGTTATTGATAACAAGATATTGGATGAAAGATCACAAAGAAAATCAGAATGTGGTCTACTAGATGAGGCTTGTCTATGCGGCCATGTTTGCAGCGTGGGGGTTCTCTA 1241 0.4287 MPYCDVGTQQATADAHLNNGIKIFYRTYGQGPTKVLLIIGLAGTHDSWGPQIKGMTGTTMPNEDETGTSDWSSCRDDNESGGGIEVCAFDNRGMGRSSVPTRKSDYTTKIMAKDAIALLDHLGWKKAHVFGHSMGAMIACKLAAMVPDRVLSLALLNVTGGGFQCFPKFDRQTFSIAYRFLKAKTPEQRAAVDLDTHYSKEYLEEYVGTDKRRTILYQQYVKGISATGMQSSYGFEGQVNACWTHKMTRTEIDLIRSAGFLISVIHGRYDIIAQIYYARRLAERLHPVARMVDLHGGHLVSHERTEEVNQALFDLIKASEVKMSPHDWTNFPKSNPLWTEKRELYFRSTREEAQNQLELKLPPYILMLNNPFFFNLQVVIDNKILDERSQRKSECGLLDEACLCGHVCSVGVL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01938 413 MobiDBLite consensus disorder prediction 56 77 - -
Bva12g01938 413 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 336 - -
Bva12g01938 413 Gene3D alpha/beta hydrolase 7 317 IPR029058 -
Bva12g01938 413 PANTHER EPOXIDE HYDROLASE 3 336 - -
Bva12g01938 413 PRINTS Epoxide hydrolase signature 83 98 IPR000639 GO:0003824
Bva12g01938 413 PRINTS Epoxide hydrolase signature 293 315 IPR000639 GO:0003824
Bva12g01938 413 PRINTS Epoxide hydrolase signature 129 142 IPR000639 GO:0003824
Bva12g01938 413 PRINTS Epoxide hydrolase signature 143 156 IPR000639 GO:0003824
Bva12g01938 413 MobiDBLite consensus disorder prediction 56 76 - -
Bva12g01938 413 SUPERFAMILY alpha/beta-Hydrolases 15 314 IPR029058 -
Bva12g01938 413 Pfam alpha/beta hydrolase fold 80 158 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01938 Bva-Chr12 15413964 15417226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01938 71 158 Acyl Lipid Metabolism Gene Families AT3G51000 42.857 4.49e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01938 - - jre:108994089 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01938 12 15413964 15417226 Bva12g01938 12 15413964 15417226 ECH