Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01927 ATGGAGAAGGACAAGCTTGCtcttttcttgcttcttgCATTAACTCTTATCCAAGGAGTGCTAGGAATTGGTGTTAATTATGGGAAGTTAGCAAACGACCTTCCTCAACCAGCTCAAGTAGCAAAATTTCTGTCAGAATCCACTGTCATTAACCGAGTAAGACTCTTCGATGCAAACCCAGAAATTTTACAAGCCTTTGCGCACACTGGGATTGATATCACCATAACAGTCCCCAGTGATGAAATCCCCCACCTTGCAAAGCTAAACCCTGCTCAACAGTGGGTCAGCACCAATGTCCAACGTTTCATTCCTGCCACCAACATAATCAGAATTCTAGTAGGCAATGAAGTATTAGCCACTGCAAATAAACTCCTCATTAGCAACCTTGTCCCTGCCATGCAAGCCCTTCACACTGCCCTCGTGGCAGCCCCACTAGACCATCGAATCAAAGTGTCCACACCACACTCATTAGGCATATTATCAAGCTCAAGCCCACCATCCTCTGGCAAATTCAGACAAGGCTACGACACACATGTAATTAAGCCATTGCTTAATTTTCTCAAGGCCACCAATGCACCCTTCATGGTCAACCCCTACCCGTTTTACGACTGCTCCACCGACACCGTCGATTATGCACTTTTCCGGCCAAATACCGGCGTGCTTGACGACTACACTAAGCTTCAATACACCAACATGTGGGATGCACAGCTTGATGCTGTTTATTCTGCCATGGAAGCTTTAGGTTTTGAAGATGTTGAAATTGTTATTGCCGAAACGGGCTGGCCCTCAATGGGCGATTTGGCCCAAGTTAGTGTGGACTCACAGAGTGCTGCTGAATATAACGCGAATCTCGTTCGTCATGTTCATTCTGGGATTGGAACACCTCTTATGCCTAACCGGACATTTGAGACCTATATTTTTGGGCTGTTCAATGAAAATCTCAAGCCCGGCCCAACTTGTGAGAGGAACTTTGGGCTTTTTAGGCCCAACATGACACCTGTATATGATATTGGAATTTTGAGGAACACTGCCGTCGCTGATGATCATCCTAAAACATTATCGTTAATCATGGTTGTTATGAGCTTGAATCTGGCAGTGAAAATCTTTGACATGGGCCTAATTTG 1124 0.4466 MEKDKLALFLLLALTLIQGVLGIGVNYGKLANDLPQPAQVAKFLSESTVINRVRLFDANPEILQAFAHTGIDITITVPSDEIPHLAKLNPAQQWVSTNVQRFIPATNIIRILVGNEVLATANKLLISNLVPAMQALHTALVAAPLDHRIKVSTPHSLGILSSSSPPSSGKFRQGYDTHVIKPLLNFLKATNAPFMVNPYPFYDCSTDTVDYALFRPNTGVLDDYTKLQYTNMWDAQLDAVYSAMEALGFEDVEIVIAETGWPSMGDLAQVSVDSQSAAEYNANLVRHVHSGIGTPLMPNRTFETYIFGLFNENLKPGPTCERNFGLFRPNMTPVYDIGILRNTAVADDHPKTLSLIMVVMSLNLAVKIFDMGLI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01927 374 ProSitePatterns Glycosyl hydrolases family 17 signature. 252 265 IPR000490 GO:0004553|GO:0005975
Bva12g01927 374 Pfam Glycosyl hydrolases family 17 23 337 IPR000490 GO:0004553|GO:0005975
Bva12g01927 374 Gene3D Glycosidases 22 345 - -
Bva12g01927 374 SUPERFAMILY (Trans)glycosidases 23 338 IPR017853 -
Bva12g01927 374 PANTHER O-GLYCOSYL HYDROLASES FAMILY 17 PROTEIN 14 345 - -
Bva12g01927 374 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 345 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01927 Bva-Chr12 15372877 15374239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01927 9 345 Miscellaneous Gene Families AT3G46570 54.839 4.34e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01927 - - ccaj:109788601 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01927 12 15372877 15374239 Bva12g01927 12 15372877 15374239 ECH