Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva12g01926 | ATGGCCAACGCTTCGATTCCTCTCCCTCGAAACGGTTTGTCTGTGCGCAATTTCCTGCCGAAAGTCCCTACTTTCCCCAATTCGAGGATCAAAACACCCATCAGAACCAGCTGCTCTGGAATCGGTGACTCGGATGGGTCGGTGACTAAGGAAAAGTTACGTAATTTCAACGATGTCAAGGGCGTGGCCTGTGGTATTCTTGCAGCTTGGACTATGACTACTGCATTTCCTGTTATTGCTGCCAACCAGAGGCTGCCTCCATTGTCAACGGAGCCCAACCGGTGTGAGCGTGCATTTATTGGTAACACAATTGGTCAGGCAAATGGTGTTTATGACAAACCGTTGGATCTCCGGTTTTGTGATTAcacaaatgagaaaaaaaatctcaaggGAAAGTCTTTATCTGCGGCACTCGTGTCAGATGCTAAGTTTGATGGTGCGGACATGACAGAAGTTGTAATGTCAAAGGCTTATGCTGTTGGTGCCAGCTTTAAAGGTGTGGACTTCTCAAACGCTGTGTTGGATCGGGTTAACTTTGAGAAAGCTGACCTTCAAGGAGCTGTATTTAAGAATACAGTACTGTCAGGCACTACTTTTGATGAAGCTAAGTTGGAAGGTGCAGTTTTTGAGGACACTATAATAGGTTACATTGATCTTCAGAAGCTATGCAGAAATAAGAGCATCAGTGAAGAATGGAGAATTGAATTAGGATGTCGATG | 719 | 0.4381 | MANASIPLPRNGLSVRNFLPKVPTFPNSRIKTPIRTSCSGIGDSDGSVTKEKLRNFNDVKGVACGILAAWTMTTAFPVIAANQRLPPLSTEPNRCERAFIGNTIGQANGVYDKPLDLRFCDYTNEKKNLKGKSLSAALVSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNFEKADLQGAVFKNTVLSGTTFDEAKLEGAVFEDTIIGYIDLQKLCRNKSISEEWRIELGCR | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva12g01926 | 239 | PANTHER | THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC | 1 | 239 | - | - | |
| Bva12g01926 | 239 | Gene3D | - | 115 | 238 | - | - | |
| Bva12g01926 | 239 | Pfam | Pentapeptide repeats (8 copies) | 174 | 211 | IPR001646 | - | |
| Bva12g01926 | 239 | Pfam | Pentapeptide repeats (8 copies) | 134 | 171 | IPR001646 | - | |
| Bva12g01926 | 239 | SUPERFAMILY | Pentapeptide repeat-like | 117 | 221 | - | - | |
| Bva12g01926 | 239 | PANTHER | THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC | 1 | 239 | IPR044195 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva12g01926 | Bva-Chr12 | 15368215 | 15370327 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva12g01926 | - | - | gmx:100785667 | 365.925 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva12g01926 | 12 | 15368215 | 15370327 | Bva12g01926 | 12 | 15368215 | 15370327 | ECH |