Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01905 ATGGCCTTGTCTGCAACATTGTCCCTCTCCTGCACTCCACAAAACAGATTATTGTCTGTACAAAAGCCACCTCTACTGTCCGCAACGACGTTGCTGGTGTCACCCCAGGATGCAAGAAAGTTGCTGCACCATGCTCTTAGATACAAAGGTGTTTCTCCAGTTGGCAAGAATCCCAAGAGATCTGTTGGGAAAGTGAAGGCATCAGTAGAGTGGGAGAAGGGCTATAAGAAGGTAGAGGTGTTCAGTAAAGAGCATCTTGCTGTGTCTCTGGCTTATGATGTGGCTGAGCTCTCCAATAAATTCACCAAAGAAAGAGGGGCTTTCAGTGTTGCATTGTCCGGTGGCTCTGTGATCAAGTACCTCAGGAAACTGGTGGAGCCTCCCTATCTTGATTCCATTGACTGGTCTAAGTGGCATGTCTTTTGGGTGGACGAGAGAGTCGTGCCAAAGGATCACTTAGATAGTAACTACAAGCTTGCCAATGATGGGTTTCTTTCCaagGTGCCAATTCCtgctaataatatttatgcCATTGATGATGCCCTGCCCGCTGATGGAGCTGCTGATGTTTATGAGACGAACCTCAGGCGCTTGGTGAAGAGCAATGTGATAGCTTCATCAGCCGTTCAATTCCCCAAATTTGATCTCGTGCTGCTCGGTGTAGGCCCAGATGGGCGTGTTGGTTCTCTATTCCCAAGACACTATGTTTTGaaggaaaaccaaaaatgGGTCACTTTCATGAAGGACTCACCAAAGCCACCACTAGAGAGAATTACTTTTACCCTTCCGGTGATAAATTCTTCTGCAAACGTAGCAATGGTGGTCACAGGAGCTGGTAAAGCAGATGCTGTTTACACTGCACTGGAGAAGACGGTTGATCAGAGTTCTGATAAACTTCCTGTTCAAATGATTTCACCTGAAGGCGAATTGAAATGGTACTTAGACAAAGGGGCAGCCTCAAAGTTGTTCAAGTATTA 977 0.4504 MALSATLSLSCTPQNRLLSVQKPPLLSATTLLVSPQDARKLLHHALRYKGVSPVGKNPKRSVGKVKASVEWEKGYKKVEVFSKEHLAVSLAYDVAELSNKFTKERGAFSVALSGGSVIKYLRKLVEPPYLDSIDWSKWHVFWVDERVVPKDHLDSNYKLANDGFLSKVPIPANNIYAIDDALPADGAADVYETNLRRLVKSNVIASSAVQFPKFDLVLLGVGPDGRVGSLFPRHYVLKENQKWVTFMKDSPKPPLERITFTLPVINSSANVAMVVTGAGKADAVYTALEKTVDQSSDKLPVQMISPEGELKWYLDKGAASKLFKY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01905 325 SUPERFAMILY NagB/RpiA/CoA transferase-like 81 322 IPR037171 -
Bva12g01905 325 CDD 6PGL 84 314 IPR005900 GO:0005975|GO:0006098|GO:0017057
Bva12g01905 325 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 83 312 IPR006148 GO:0005975
Bva12g01905 325 TIGRFAM pgl: 6-phosphogluconolactonase 82 322 IPR005900 GO:0005975|GO:0006098|GO:0017057
Bva12g01905 325 Gene3D - 74 322 - -
Bva12g01905 325 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 324 IPR039104 -
Bva12g01905 325 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01905 Bva-Chr12 15255749 15257253 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01905 K01057 - gmx:100804571 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01905 12 15255749 15257253 Bva12g01905 12 15255749 15257253 ECH