Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01890 GTTTCTAAATCTCAAGTCATACACAATTCGCAGTTCTCAATTCTCACTCTAATTAAGAAGCTGACCTCAAACTCCATACTCTTGCCAGCACTTGCTATGGCTCAAGCACTATCTTTGTCAACACGTTCACCTCTGCTATCCCGCAAGGCCAGAAACAATGTGGCTGTGCCTCGTTTGGCAAGCTTCCCATCATCAAGAAAGGCCATTTCGTTACCACGTTTGCGATTGGTTAGAGCTAAGGCGCCGGAAGAAGACTCATCTCTGGAAGTGCAGCATCTTGATGATAGCAACCAAGACACTACTGCTGTGGAGAACAGGCCTCGTAAACTAATCACGAATATTTCTCCATATGGAATTTTGGACCCTTGGTCACCCATGAGGAGCATGCGTCAAATGCTGGACACAATGGATAGGATTCTCGAAGATGCCATGACATTTCCTGGAAGAAACAGAGGATCAGGCCAGGTTCGTGCTCCTTGGGACATTAAAGATGAAgatcatcaaatcaaaatgcGATTCGACATGCCTGGTCTTACCAAGGAGGATGTCAAGGTCTCTGTTGAGGATGAAGTGCTCATTGTAAAAGCTGCTCATAACCAACGAGAAGGTGGAGATGAATCTTGGTCGACCACAAGCTATAGCTCCGATGACACTCTGCTCCGTCTTCCTGATAACTGCGACAGTGAAAAGGTTCGGGCACAGCTCCAAAATGGTGTGCTTTACATCACTATCCCCAAGATCAAAGGTGAACGCAAGGTCATCGAAGTGGATATTCAGTG 779 0.4544 VSKSQVIHNSQFSILTLIKKLTSNSILLPALAMAQALSLSTRSPLLSRKARNNVAVPRLASFPSSRKAISLPRLRLVRAKAPEEDSSLEVQHLDDSNQDTTAVENRPRKLITNISPYGILDPWSPMRSMRQMLDTMDRILEDAMTFPGRNRGSGQVRAPWDIKDEDHQIKMRFDMPGLTKEDVKVSVEDEVLIVKAAHNQREGGDESWSTTSYSSDDTLLRLPDNCDSEKVRAQLQNGVLYITIPKIKGERKVIEVDIQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01890 259 CDD ACD_sHsps-like 161 246 - -
Bva12g01890 259 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 151 259 IPR002068 -
Bva12g01890 259 Gene3D - 118 258 IPR008978 -
Bva12g01890 259 SUPERFAMILY HSP20-like chaperones 137 258 IPR008978 -
Bva12g01890 259 PANTHER 26.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 33 259 IPR044587 GO:0009408
Bva12g01890 259 Pfam Hsp20/alpha crystallin family 161 259 IPR002068 -
Bva12g01890 259 PANTHER HEAT SHOCK PROTEIN 21, CHLOROPLASTIC 33 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01890 Bva-Chr12 15194979 15195978 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01890 K13993 - gmx:548078 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01890 12 15194979 15195978 Bva12g01890 12 15194979 15195978 ECH