Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01873 ATGTCTCCAGGTCCCGTTGTTGAGGTCACCGCCGAGGCTGATACCGAGCAGCAAACTCCCATCGTCGAGGAGACCTTGAAGAAGAAGCCTCAGCCCCAGGATGAAGACGCCCCCGTTGTTGAGGATGTGAAGGACGATGACAAAGACGAAGACGACGATGATGATGAGGACGACGACGACGATGATGAGAAGGAAGACGGAGCTCAAGGTGGTACTGAGGGTTCAAAGCAGAGCAGAAGTGAGAAAAAGAGTAGAAAAGCAATGTTGAAGCTTGGACTGAAACCTGTTACTGGTGTCAGCAGAGTCACAATcaagagaacaaaaaatATACTCTTTTTCATCTCAAAACCTGATGTCTTTAAGAGCCCAAATTCTGAGACCTATGTCATATTCGGTGAAGCAAAAATAGAGGATTTGAGCTCTCAGTTGCAGACACAGGCTGCTCAGCAGTTTAGGATGCCAGATATGGGATCTGTAATGGCTAGACCCgatgctgctgctgctgcagcAGCTTCTGGAACACAGCCTgatgaggaagaagaggaggtTGATGAAACTGGAGTGGAGCCTCGGGATATTGATTTGGTCATGACCCAGGCAGGAGTGTCAAGAAGCAAGGCTGTTAAGGCTCTCAAGACTCACAACGGGGACATTGTTGGTGCCATTATGGAGCTCACTACTTA 683 0.4466 MSPGPVVEVTAEADTEQQTPIVEETLKKKPQPQDEDAPVVEDVKDDDKDEDDDDDEDDDDDDEKEDGAQGGTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMARPDAAAAAAASGTQPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01873 227 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 12 226 IPR016641 GO:0005854
Bva12g01873 227 Pfam NAC domain 81 136 IPR002715 -
Bva12g01873 227 MobiDBLite consensus disorder prediction 168 192 - -
Bva12g01873 227 CDD UBA_NAC_euk 190 226 - -
Bva12g01873 227 MobiDBLite consensus disorder prediction 1 87 - -
Bva12g01873 227 MobiDBLite consensus disorder prediction 39 67 - -
Bva12g01873 227 MobiDBLite consensus disorder prediction 21 38 - -
Bva12g01873 227 Gene3D - 188 225 - -
Bva12g01873 227 Gene3D - 87 140 IPR038187 -
Bva12g01873 227 SMART NAC_2 81 137 IPR002715 -
Bva12g01873 227 ProSiteProfiles NAC A/B domain profile. 78 143 IPR002715 -
Bva12g01873 227 Pfam HYPK UBA domain 187 226 IPR044034 -
Bva12g01873 227 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 12 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01873 Bva-Chr12 15115145 15117311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01873 K03626 - gmx:100780632 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01873 12 15115145 15117311 Bva12g01873 12 15115145 15117311 ECH