Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01868 ATGGGTGAGGAAGCAAAGCAGGAGCAACCCAAGGCTGAGGCAGAGGCAAAGCCAAcagaggagaagaaagaagagaaaacagaagagaagaaagaagagaaaacagacgagaagaaagaagagaaagcagaagaggagaagaaggaagagcCAAAACCGCCAGCACCTTGTGTGCTGTTTGTGGACCTGCATTGTGTGGGATGTACcaagaaaattcagaaaactATCATGAAAATGAGAGGAGTTGAGGGAGTGGTAATTGATATGGCTAAGAATGAAGTGACTATAAAAGGAATCGTAGAGCCTCAGGCAATCTGCACAAAAATAACCAAGACAACAAAAAGGAGAGCCACGGTTATATCTCCATTGCCTGCTGCTGAAGGAGAGCCTATACCAGAAGTTGTTACCTCCCAGGTTAGTGGACCAGTAACTGTTGAACTTAATGTAAACATGCATTGTGAGGCTTGTGCTGAGCAGCTCAAGAGAAAGATACTCAAAATGAGAGGAGTGCAAACGGCATCAACAGAGCTTAGCACAGGGAAGGTTATTGTGACAGGAACCATGGATGCACAAAAGCTAGTGGATTATGTCTATAGACGCACCAAGAAGCAAGCCAAAATAGTGCCACAGCCAGAGCCTGaaccagaaaagaaagaagaaaacaaagaaggtGAAAAACCAGCAGAAGAGGCAAaaccagaagagaaaaaagaagaaaacgcagagaagaaagaagaggagaaaCCAGCAGAGGAACCCAAGAAAGAAGAGCGCGGtggtgaagaaaagaaagaagaagaaaagagtactggtgaagaaggaaaagaagaagagggcAAGAAAGAAGGTGCTGATCAAGCTGGTGAGGTGGTTAATCTTGAGGAGGAACACATGAAGAGGATGATGTACTATTACCAGCCAATCTACATGATTGAACGAATCCCACCTCCTCAGCTATTCAGCGATGAAAATCCCAATGCATGTTGCATTTcata 995 0.3397 MGEEAKQEQPKAEAEAKPTEEKKEEKTEEKKEEKTDEKKEEKAEEEKKEEPKPPAPCVLFVDLHCVGCTKKIQKTIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICTKITKTTKRRATVISPLPAAEGEPIPEVVTSQVSGPVTVELNVNMHCEACAEQLKRKILKMRGVQTASTELSTGKVIVTGTMDAQKLVDYVYRRTKKQAKIVPQPEPEPEKKEENKEGEKPAEEAKPEEKKEENAEKKEEEKPAEEPKKEERGGEEKKEEEKSTGEEGKEEEGKKEGADQAGEVVNLEEEHMKRMMYYYQPIYMIERIPPPQLFSDENPNACCIS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01868 331 Pfam Heavy-metal-associated domain 148 194 IPR006121 GO:0046872
Bva12g01868 331 Pfam Heavy-metal-associated domain 59 111 IPR006121 GO:0046872
Bva12g01868 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 234 331 IPR044258 GO:0046872
Bva12g01868 331 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 246 IPR044258 GO:0046872
Bva12g01868 331 MobiDBLite consensus disorder prediction 204 292 - -
Bva12g01868 331 CDD HMA 63 112 IPR006121 GO:0046872
Bva12g01868 331 ProSiteProfiles Heavy-metal-associated domain profile. 150 197 IPR006121 GO:0046872
Bva12g01868 331 ProSiteProfiles Heavy-metal-associated domain profile. 63 111 IPR006121 GO:0046872
Bva12g01868 331 MobiDBLite consensus disorder prediction 1 53 - -
Bva12g01868 331 Coils Coil 20 50 - -
Bva12g01868 331 SUPERFAMILY HMA, heavy metal-associated domain 58 114 IPR036163 GO:0046872
Bva12g01868 331 CDD HMA 146 186 IPR006121 GO:0046872
Bva12g01868 331 Gene3D - 55 118 - -
Bva12g01868 331 Gene3D - 141 207 - -
Bva12g01868 331 SUPERFAMILY HMA, heavy metal-associated domain 139 203 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01868 Bva-Chr12 15097772 15099991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01868 - - ccaj:109790710 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01868 12 15097772 15099991 Bva12g01868 12 15097772 15099991 ECH