Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01479 ATGCCAATGATTGTATCCTGGAAGTTACTCACTTCCTTTCTTATCCTTAACATGTTCTTCTCTTGTCCATACTCCAGCATATTCACTATAATAAACAACTGCCACCATACCATATGGCCCGGTACACTCGCAGGTTCAGGCACGCCTCCACTTGAACCAACCGGATTCCGGTTGGAACCAGGCCAAAGTGCTAAACTTACAAGCGCTGCAGGATGGTCAGGACGGATATGGGCAAGGACTGGTTGCAGATTTGATGCATCAGGAATTGGCAAATGCCAAACAGGTGACTGTGGGGGAAGGCTTGAATGTGATGGAAATGGTGCTGTTCCCCCTACCTCGCTCTTTGAGATAACACTTGGTGCAGGTAATCAGCAAGACTTCTACGATGTCAGCATGGTAGATGGCTACAATCTCCCACTAGTTGCAGTACCACGAGGCATTTACGGTGGTAAATGCAATGCCACAGGCTGCTTATCTGATCTCAATAGGAGTTGCCCCAAAGAGCTTCAAGTAGTGGGTGGAACTGGAGATGGATACCAACGTCGCGTAGTTGCCTGCAAGAGTGCTTGCGAGGCATTTGGGTTGGATCAGTACTGCTGTAGTGGAGAATTTGCCAATCCAACAACATGCCAGCCGTCCTTTTATTCAACCATTTTCAAGAAGGCTTGTCCAAGAGCATATAGCTATGCATTTGATGATGGCACCAGCACTTTCACTTGCAAAGCTTATGAATATGACATCATTTTCTGCCCCAGCGGCACTAGGACAAAAAAACGAACTGTTGCACCTCCACCACCACAAATTGAACAGCCCTATGAGAAGGTTAGGTGTGTGGTTTCTTCCTCAAATATTCTCTTACCCTTTCCAATGATAATCATTCTCTTAGCCATCAGTCTTTCTCGGCATTTGTA 911 0.4632 MPMIVSWKLLTSFLILNMFFSCPYSSIFTIINNCHHTIWPGTLAGSGTPPLEPTGFRLEPGQSAKLTSAAGWSGRIWARTGCRFDASGIGKCQTGDCGGRLECDGNGAVPPTSLFEITLGAGNQQDFYDVSMVDGYNLPLVAVPRGIYGGKCNATGCLSDLNRSCPKELQVVGGTGDGYQRRVVACKSACEAFGLDQYCCSGEFANPTTCQPSFYSTIFKKACPRAYSYAFDDGTSTFTCKAYEYDIIFCPSGTRTKKRTVAPPPPQIEQPYEKVRCVVSSSNILLPFPMIIILLAISLSRHL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01479 303 Pfam Thaumatin family 32 251 IPR001938 -
Bva12g01479 303 PANTHER THAUMATIN-LIKE PROTEIN 1B 4 267 - -
Bva12g01479 303 CDD TLP-PA 27 250 - -
Bva12g01479 303 Gene3D Thaumatin 27 251 IPR037176 -
Bva12g01479 303 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Bva12g01479 303 ProSiteProfiles Thaumatin family profile. 25 253 IPR001938 -
Bva12g01479 303 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Bva12g01479 303 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Bva12g01479 303 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Bva12g01479 303 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bva12g01479 303 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bva12g01479 303 PIRSF PR5 1 293 IPR001938 -
Bva12g01479 303 SUPERFAMILY Osmotin, thaumatin-like protein 27 252 IPR037176 -
Bva12g01479 303 SMART tha2 28 251 IPR001938 -
Bva12g01479 303 PANTHER OS03G0233200 PROTEIN 4 267 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01479 Bva-Chr12 12680658 12681806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva12g01479 3 252 Receptor kinase-like Gene Family AT5G38280 45.669 2.43e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01479 - - aprc:113850677 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01479 12 12680658 12681806 Bva12g01479 12 12680658 12681806 ECH