Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01477 ATGGAGCAAGGGAAACAGGAAGTGATGGGGGTGAAGGGGTCCCCTCAGCAACTTCAGAACCCCATAGAGCAGCTCCAGGCACGCTTCAAAGAGCTGGAGACTGGCCTCAGGGCGTGGCTGGCTAAGCAATCCTTGCCCGTCGAGGCTGCCATCGTCACCGCCACTAGCGCTGCTCAAGGAGCAGCTATTGGTGGTTTGATGGGTTCTCTAACCGGCGATATTTCCTCTTCGTTTCCCAATCCTCCTCCTCAGGCCTCTCTCGACCCTCAAGCCATGGCATCTTTTAAGCAAGCCCagGCTCTTTCTGGGGGTCCTTTGGTACAAGCTCGCAACTTCGCTGTCATGACAGGAGTCAATGCCGGTATTTCCTGTGTCTTGAAAAGGTTGAGGGGGAAAGAAGATGTCCAGTCCAGCATGGTTGCAGCTTTTGGTTCTGGAGCGATGTTTTCATTGGTAAGTGGCTTAGGTGGACCAAATCAAGTAGGCAATGCCGTCACTTCTGGACTTTTCTTTGCACTTGTTCAAGGTGGACTTTTCCAGTTCGGACAAAAGTTTTCACAACCAGCAGCTGAAGATGTTCGCTATACTAAAACGAGAAGCATGTTGCAGAACCTTGGCCTTCAGGATTACGAGAAGAATTTTAAGAAAGGCTTATTAACAGATAACACTTTGCCATTGCTCTCAGACAGTGCTCTGAGAGACGTCAAAATCCCTCCTGGACCTAGACTGCTAATCCTTGATCACATTCAGAGGAACAAAGGTTTGAGAGGGAAGTA 776 0.4961 MEQGKQEVMGVKGSPQQLQNPIEQLQARFKELETGLRAWLAKQSLPVEAAIVTATSAAQGAAIGGLMGSLTGDISSSFPNPPPQASLDPQAMASFKQAQALSGGPLVQARNFAVMTGVNAGISCVLKRLRGKEDVQSSMVAAFGSGAMFSLVSGLGGPNQVGNAVTSGLFFALVQGGLFQFGQKFSQPAAEDVRYTKTRSMLQNLGLQDYEKNFKKGLLTDNTLPLLSDSALRDVKIPPGPRLLILDHIQRNKGLRGK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01477 258 SUPERFAMILY SAM/Pointed domain 198 253 IPR013761 -
Bva12g01477 258 Pfam SAM domain (Sterile alpha motif) 202 251 IPR001660 GO:0005515
Bva12g01477 258 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 173 - -
Bva12g01477 258 Gene3D - 190 256 IPR013761 -
Bva12g01477 258 CDD SAM_superfamily 200 251 - -
Bva12g01477 258 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 8 251 IPR039175 GO:0042721|GO:0045039
Bva12g01477 258 Coils Coil 22 42 - -
Bva12g01477 258 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2 8 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01477 Bva-Chr12 12671154 12675573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01477 - - zju:107414926 431.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01477 12 12671154 12675573 Bva12g01477 12 12671154 12675573 ECH