Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva12g01475 ATGGATTTGCAGAATAATATGCAACCTGAATTGGGGAAATTGGAACAAATTATTTCTCAGTTTCTTTTGAAGAGCTTGCACATCGTTTTAGACTCAAGGGTTCCTTCTCTTCACCCGCATGATAAAAGTGGCGACCTATCACTGGGTTCTCGTGTCAGGAAGAGTGATAAATGGTTTAACTTAGCATTAGGTGATCGACCTGCTGCTTTAGATAACTTGAACTTCTGGCATGGAAATTTGATGGATCCAATGATTATTGACATTATACTAGTTCATGAAGGGACTGGTTCATCTGTTGAGACCGTTATAGAGAGGTGGGTTACACAGTATGAGTGTCCACGAGTAATGGCTCCTCAAACTAATGATATTACTAGCTCTTACAAGAAGACCTATAAGAAATCAATAGTACTGTTCCGTGCTCTTTATTCACAAATGAGGCTTCTCCCGGCATATCGGATATTTCGGCAGCTGAATACATCTAGTCATACttgtaattttgatattatttacaaGGTGTCTTCATTTAGTGATCCCTTCTCTAGGGCAGAGGGGGAAATGATGGAAGAATACAATTTTACACCGGTTGAAGCCCTTCCAGGCCGCCTTTCTATATCTGTAACCTACCGTACTACATTATCTGATTTCAACCTTCAGTTTTCAGCATCATTaccaccaaaaataattactgaTTATGTTGGAAGCCCCAATACAGACCCTCTGAGGTCTTTCCCTGTCTCAGACAAGGGTGTTCATGCCACTTCCTTTTCACTGAGAGGGTTACGACCTCAGTCTTCTGCTACACTTCAACGTCCTCATAGCTGGACAAGTGGCTTCCACAAGGCAGCTCCTTTTATGCAGAACCAACCCTTTGATGGATCGCCACCAGTGTATCGTGCTTCTCCCATGCATTACGATTATCCTTCTCCGCCTACTGATAATTATGGTAACAGAGTTCAAAACTATCGACCACCAACTCGGCAAAGGTCTACTACAAGTTATGATGAGTATCAACTTTCTCCTCCATTCTCCCCTTCACCTTCTCCATCTCCACCTACATACTTTTCTAGTGGCAATTTTATACCAACTCGTATGCGTTCAGAAACTGCCCCTGTAACCATCCCTCATCCAATGATGGGCAGAAGTTCTAGAAACCTTTCTCCCAATTTGTCAGATCATAGTagaaattctttgccacctttATCTCCCAGAAGCATAAAGAATGATACTTCATCGCAAGAGTCTCCGTCTGGAATAAGGTCATTCAGGAAAATAGAAACTTCAAGGATTGGAGAGATGCATCCTGGGATAGCGAATTATGCTGGTCAAAAGATTGCCAAAGATAACAGGGATGATTCAGGGCGGTTCTCAGGATTGTTATCTTCTAGTGGCTCACCACGTATTGGATTTTCTAGAAGCTCCAGTAGATTGTCATTCCAGGATGACTTGGATGATGGTGATTTTTCTTGTCCTTTTGATGTAGATGATGTTGATACATCAGATATTCAACCCAGTCAGAATGTAGGAGTTCTTGTACACATGCTTAGGACAGCTCCCCCTCTTCGTCAAGATCCAAGTTGTTATTCCTCTAATTCCCTGAAGCCTGAAATTGAGGAAGGAGTTCCTAGTGCTTCCGGATTCTTTATGCATCGAAAAACTGCTGATGCGCTTGAAGAGCTCAGGAGTTACAGAGAAATGAGAGACCTTCTGCTTTCTAAGAGTGGGACTCCGTTCACGAGCAAAGATGAAGCTTA 1751 0.4123 MDLQNNMQPELGKLEQIISQFLLKSLHIVLDSRVPSLHPHDKSGDLSLGSRVRKSDKWFNLALGDRPAALDNLNFWHGNLMDPMIIDIILVHEGTGSSVETVIERWVTQYECPRVMAPQTNDITSSYKKTYKKSIVLFRALYSQMRLLPAYRIFRQLNTSSHTCNFDIIYKVSSFSDPFSRAEGEMMEEYNFTPVEALPGRLSISVTYRTTLSDFNLQFSASLPPKIITDYVGSPNTDPLRSFPVSDKGVHATSFSLRGLRPQSSATLQRPHSWTSGFHKAAPFMQNQPFDGSPPVYRASPMHYDYPSPPTDNYGNRVQNYRPPTRQRSTTSYDEYQLSPPFSPSPSPSPPTYFSSGNFIPTRMRSETAPVTIPHPMMGRSSRNLSPNLSDHSRNSLPPLSPRSIKNDTSSQESPSGIRSFRKIETSRIGEMHPGIANYAGQKIAKDNRDDSGRFSGLLSSSGSPRIGFSRSSSRLSFQDDLDDGDFSCPFDVDDVDTSDIQPSQNVGVLVHMLRTAPPLRQDPSCYSSNSLKPEIEEGVPSASGFFMHRKTADALEELRSYREMRDLLLSKSGTPFTSKDEA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva12g01475 583 PANTHER UNCHARACTERIZED 1 579 IPR040182 GO:0000045
Bva12g01475 583 MobiDBLite consensus disorder prediction 379 419 - -
Bva12g01475 583 Gene3D HORMA domain 11 215 IPR036570 -
Bva12g01475 583 MobiDBLite consensus disorder prediction 312 340 - -
Bva12g01475 583 MobiDBLite consensus disorder prediction 287 419 - -
Bva12g01475 583 PANTHER AUTOPHAGY-RELATED PROTEIN 13A 1 579 - -
Bva12g01475 583 Pfam Autophagy-related protein 13 95 211 IPR018731 GO:0006914|GO:1990316
Bva12g01475 583 Pfam Autophagy-related protein 13 18 93 IPR018731 GO:0006914|GO:1990316
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva12g01475 Bva-Chr12 12662053 12665125 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva12g01475 K08331 - gmx:100818104 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva12g01475 12 12662053 12665125 Bva12g01475 12 12662053 12665125 ECH