Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02268 ATGCCCCAGTTGGGGATGACGCCGCCTTTTATCCAATCGTTCATATTATCTTGTTCGGTTCAGGTTGGGGAGTTTCAACAACTCGTCTCTGTCGAAGTTGCAATGGCGTCCCCTCTTTTCACCAGCCAACAGAGTCTTCCTTCATTTTGTTACTTTTCGTCCTCCTTATTCTTCTCATCTACAAAACTTTATTCAAATTACCCCAGTAACAATTTCCCCCAGTTCCGTACCAGCAAACACCCTCTCCCAACTGTATCTCCATATCCAAGGCGTCTCACTGTTATTGCAATGGCTCCCCCTAAACCAGGtggaaaagcaaagaaagTGGTTGGACTTATAAAGTTGGCTCTAGAGGCTGGGAAGGCTACACCTGCTCCTCCTGTCGGCCCTGCACTCGGTTCCAAGGGTGTGAATATTATGGCTTTCTGTAAGGATTACAATGCCAGGACCGCGGACAAGGCCGGTTATGTCATTCCCGTGGAAATTACGGTCTACGATGATAAAAgctttacttttatattgaAGACACCGCCTGCTTCTGTTCTGCTTCTTAAGGCAGCAGGGGTGGAAAAGGGTTCTAAAGACCCCAAGTTGGAAAAAGTAGGAAAGATCACAATTGACCAGTTGCGTACAATTGCAGCCGAAAAGCTGCCTGACTTGAATTGCTCCAGCATCGAATCCGCAATGAGAATCATTGCTGGTACTGCCGCCAATATGGGAATTGAAGTTGATCCTCCTGTTCttgaaccaaaaaagaaagaacttgtGTA 770 0.4377 MPQLGMTPPFIQSFILSCSVQVGEFQQLVSVEVAMASPLFTSQQSLPSFCYFSSSLFFSSTKLYSNYPSNNFPQFRTSKHPLPTVSPYPRRLTVIAMAPPKPGGKAKKVVGLIKLALEAGKATPAPPVGPALGSKGVNIMAFCKDYNARTADKAGYVIPVEITVYDDKSFTFILKTPPASVLLLKAAGVEKGSKDPKLEKVGKITIDQLRTIAAEKLPDLNCSSIESAMRIIAGTAANMGIEVDPPVLEPKKKELV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02268 256 SMART rl11c 113 244 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 Pfam Ribosomal protein L11, N-terminal domain 113 170 IPR020784 -
Bva11g02268 256 Pfam Ribosomal protein L11, RNA binding domain 175 243 IPR020783 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 Gene3D - 106 175 IPR036796 -
Bva11g02268 256 TIGRFAM L11_bact: ribosomal protein uL11 107 244 IPR006519 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 CDD Ribosomal_L11 113 243 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 Gene3D - 176 256 IPR036769 -
Bva11g02268 256 ProSitePatterns Ribosomal protein L11 signature. 230 244 IPR020785 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 SUPERFAMILY Ribosomal protein L11, C-terminal domain 171 244 IPR036769 -
Bva11g02268 256 Hamap 50S ribosomal protein L11 [rplK]. 109 245 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 PANTHER RIBOSOMAL PROTEIN L11 70 244 - -
Bva11g02268 256 PANTHER 60S RIBOSOMAL PROTEIN L12 70 244 IPR000911 GO:0003735|GO:0005840|GO:0006412
Bva11g02268 256 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 104 188 IPR036796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02268 Bva-Chr11 18233939 18236752 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02268 K02867 - pop:7490712 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02268 11 18233939 18236752 Bva11g02268 11 18233939 18236752 ECH