Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02263 ATGGCCGGCACCAGAGCCCCGGGCTTTGTTTTCCCCAAACCCAACAAAAAGCGCACCAGCGGTGCCGATGACGTGGACTGCGGCGATGCTCGTGCTCATAACGCGTCAAAGAAATCAATGCTTTCACCACCCGCACTAGGCTTGGGCACATGTTGCATGGACCCCGCAGCCGCATTGGCTAACGCCCGCCACGAGTTCGGCGAGCATGGCGGGGTGAACATGTCGATCGAGGCCTCCGCCACGTTCACGGTGATGGAACCGGAGACTATGCGGCGCATGTTCGCCGGGGAACTTGGGCCGGATCGTGATTTTTTCATCTACAGCCGACACTTCAATCCGACCGTGTTGAACCTGAGCCGTCGGATGGCGGCCCTCGAAGGCACGGAAGCTGCGTACTGCACGGCGAGCGGTATGTCGGCCATCTCTTCGGTTCTGTTGCAGCTGTGCAGCAGCGGTGGACACGTGGTGGCTTCAAGATCCCTGTACGGCGGGACCCATGCACTGTTGACGCACTTCCTGCCTAGGGCGTGCAACATAACGACGACGTTCGTGGACATAAAGGATTTGGATACGGTGAAGAATGCCATGGTACAGGGGAAGACTAAGGTGCTATTCACGGAATCCATATCTAATCCCACTCTCACGGTGGCCAATATACCAGAGCTCAGTAGGTTAGCCCACGACAAAGGAGTCACGCTCGTCGTCGACAACACCTTCGCTCCCATGGTTCTTTCCCCAGCTCGTCTTGGAGCTGACGTCGTGGTTCACAGCATCTCCAAGTTCATCAGTGGTGGGGCCGACATCATCGCAGGGGCTGTGTGCGGCCCAGCAAAGCTGGTGAACTCGATGATGGACTTGCACCAAGGGAGCCTAATGTTGCTAGGCCCAACAATGAACCCGAAGGTGGCATTTGAACTATCGGAGAGAATCCCCCACTTGGGGCTTAGAATGAAAGAGCACTGCAAGCGCGCTCTGGTTTTCGCTACAAGGCTGAAGAAAGCTGGAATGAAGGTGGTGTATCCAGGTCTCGAAGATCACCCAGATCATGAGTTGCTGAAATCGATGGCTAACGAGGATTACGGATACGGTGGTCTGATGTGCATAGACATGGAAACGGAGGAGAGGGCTAACAAGTTGATGCACCAATTGCAGAACTATGCCCAGTTTGGGTTCGTAGCGGTGAGCTTGGGCTATTATGAGACTCTGATGTCATGCTCTGGCAGTAGCACCAGCAGCGAGTTGAATGCTGAGGAAAAGGCCTTTGCTGGGATCTCGCCGGGTCTGGTCAGGATGTCAATTGGATACGTTGGGACATTGGACCAGAAGTGGGCTCAGCTTGAAAAGGCCCTTAATTGCCAGACTCAATTGATACAATACTA 1379 0.5482 MAGTRAPGFVFPKPNKKRTSGADDVDCGDARAHNASKKSMLSPPALGLGTCCMDPAAALANARHEFGEHGGVNMSIEASATFTVMEPETMRRMFAGELGPDRDFFIYSRHFNPTVLNLSRRMAALEGTEAAYCTASGMSAISSVLLQLCSSGGHVVASRSLYGGTHALLTHFLPRACNITTTFVDIKDLDTVKNAMVQGKTKVLFTESISNPTLTVANIPELSRLAHDKGVTLVVDNTFAPMVLSPARLGADVVVHSISKFISGGADIIAGAVCGPAKLVNSMMDLHQGSLMLLGPTMNPKVAFELSERIPHLGLRMKEHCKRALVFATRLKKAGMKVVYPGLEDHPDHELLKSMANEDYGYGGLMCIDMETEERANKLMHQLQNYAQFGFVAVSLGYYETLMSCSGSSTSSELNAEEKAFAGISPGLVRMSIGYVGTLDQKWAQLEKALNCQTQLIQY 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02263 459 SUPERFAMILY PLP-dependent transferases 67 450 IPR015424 -
Bva11g02263 459 CDD CGS_like 70 451 IPR000277 GO:0019346|GO:0030170
Bva11g02263 459 Gene3D - 56 310 IPR015421 GO:0003824
Bva11g02263 459 PANTHER METHIONINE GAMMA-LYASE-LIKE 47 451 - -
Bva11g02263 459 MobiDBLite consensus disorder prediction 1 27 - -
Bva11g02263 459 Pfam Cys/Met metabolism PLP-dependent enzyme 67 449 IPR000277 GO:0019346|GO:0030170
Bva11g02263 459 Gene3D Aspartate Aminotransferase, domain 1 314 453 IPR015422 GO:0003824
Bva11g02263 459 PANTHER TRANS-SULFURATION ENZYME FAMILY MEMBER 47 451 IPR000277 GO:0019346|GO:0030170
Bva11g02263 459 PIRSF CGS 53 453 IPR000277 GO:0019346|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02263 Bva-Chr11 18210800 18212855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02263 K01761 - tcc:18605977 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02263 11 18210800 18212855 Bva11g02263 11 18210800 18212855 ECH