Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02262 ATGTCTGAACCAGAACTGCAAAACGGACTTCAACCAGCTCCTCAAACTGAAGCTGCACCAAATCCCAAGCCGGATACAGAAAGAGTACCTGAACCGCTACCGACAACAGAATTTGAACCAAAACCTAAACTAGAATCCGGATCAGAACCTATTCGAGAAGCTGAGCCAGCGGTGGCAGATGCAGATCTCAAGCTCGACGAAGCCAAAGGAGCCTCGATCCACTCTAATAACTCCGACAACATTGCCTCTGCTGAACCAACCTCTCATCCTGAGCTAAGAAAAGACGAAGGAAGTCGAACTTTCACGATGAGAGAATTGCTTAATGGATTGAAAAATGACCAGGGAAGCGATGACGCAAACGATTCTGAACCGCAGAGAGAAGACGGAAACTCTCCTTACAGCGAAGAAAGTCAACGGCAACAGTACTCGGAGCAGAATAATGCTGCAATGGATTTGATAAGCAGTGTTATAGGTGTTGATGAGGAAGGCCGGTCTCGACAACGCATTCTTACATTTGCTGCCAGGAGGTATGCTAGTGCAATTGAGAGAAATCCAGAAGATTATGATGCACTGTACAATTGGGCATTGGTACTTCAGGAAAGTGCTGATAATGTTAGTCCAGATTCCACTGCACCTTCCAAAGATGCATTGCTTGAGGAAGCGTGTAGAAAATATGATGAGGCCACTCGCCTCTGCCCCACACTTCACGATGCTTTCTACAATTGGGCAATAGCAATCTCTGATCGTGCAAAAATGCGTGGCCGCACAAAGGAAGCTGAAGATCTATGGAAACAGGCAACAAGAAACTATGAAAAAGCAGTCCAACTGAATTGGAACAGTCCCCAGGCGCTTAACAACTGGGGACTTGCTCTTCAGGAACTCAGTGCAATTGTCCCAGCACGAGAAAAGCAGAAAATTGTAAGAACCGCCATTAGCAAGTTCCGTGCAGCTATACAGTTGCAATTTGATTTCCATCGTGCGATTTACAATCTTGGAACTGTTCTGTATGGATTAGCAGAAGATACTTTAAGAACTGGGGCATCAGTCAGTACTAAGGATGTTTCACCTGATGAATTGTACAGCCATTCTGCAATATATATTGCAGCTGCTCATGCATTAAAACCAAACTATTCAGTTTACACTAGTGCCTTGCGGTTGGTGCGATCTATGCTACCACTACCACATCTTAAAGTTGGATTTTTAACTGCACCACCTGCGGGGAAGCCAATTGCACCTCATAGTGACTGGAAACGATcagaattcattttaaatcatGAAAGGCTTCAACAAATGTATAGAGGTGAAAAGAACCAAGTATCTCGAAGTCTCTCAGGCAGATCGATAGATTCAGTTAATGGTGACAAGAAAACTGTTAAAGTTGATATTGCTGATATTGTTTCTGTATCAGCATGTGCCGATCTGACTTTACCACCTGGTGCTGGCCTCTGCATTGATACAATTCATGGACCAGTTTTCTTGGTTGCTGACTCATGGGAATTGTTGGATGGATGGTTGGATGCAATTCGTCTTGTTTACACAATATACGTGCGAGGCAAAAGTGATGTACTGGCAGGCGTAATAACAGGATG 1589 0.4393 MSEPELQNGLQPAPQTEAAPNPKPDTERVPEPLPTTEFEPKPKLESGSEPIREAEPAVADADLKLDEAKGASIHSNNSDNIASAEPTSHPELRKDEGSRTFTMRELLNGLKNDQGSDDANDSEPQREDGNSPYSEESQRQQYSEQNNAAMDLISSVIGVDEEGRSRQRILTFAARRYASAIERNPEDYDALYNWALVLQESADNVSPDSTAPSKDALLEEACRKYDEATRLCPTLHDAFYNWAIAISDRAKMRGRTKEAEDLWKQATRNYEKAVQLNWNSPQALNNWGLALQELSAIVPAREKQKIVRTAISKFRAAIQLQFDFHRAIYNLGTVLYGLAEDTLRTGASVSTKDVSPDELYSHSAIYIAAAHALKPNYSVYTSALRLVRSMLPLPHLKVGFLTAPPAGKPIAPHSDWKRSEFILNHERLQQMYRGEKNQVSRSLSGRSIDSVNGDKKTVKVDIADIVSVSACADLTLPPGAGLCIDTIHGPVFLVADSWELLDGWLDAIRLVYTIYVRGKSDVLAGVITG 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02262 529 SUPERFAMILY TPR-like 173 295 IPR011990 GO:0005515
Bva11g02262 529 Pfam Plant specific mitochondrial import receptor subunit TOM20 282 335 - -
Bva11g02262 529 Pfam Plant specific mitochondrial import receptor subunit TOM20 169 276 - -
Bva11g02262 529 MobiDBLite consensus disorder prediction 116 133 - -
Bva11g02262 529 MobiDBLite consensus disorder prediction 1 143 - -
Bva11g02262 529 MobiDBLite consensus disorder prediction 1 15 - -
Bva11g02262 529 MobiDBLite consensus disorder prediction 42 69 - -
Bva11g02262 529 MobiDBLite consensus disorder prediction 71 85 - -
Bva11g02262 529 Gene3D Tetratricopeptide repeat domain 159 277 IPR011990 GO:0005515
Bva11g02262 529 Gene3D Tetratricopeptide repeat domain 278 398 IPR011990 GO:0005515
Bva11g02262 529 PANTHER - 2 529 - -
Bva11g02262 529 PANTHER PROTEIN HLB1 2 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02262 Bva-Chr11 18198989 18207048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02262 - - gmx:100786164 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02262 11 18198989 18207048 Bva11g02262 11 18198989 18207048 ECH