Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02257 ATGGATGACGATGAGATCAGATCCCCTCTCATAGTACCCAAGAAGGAGgaagacgaagaagaagaTCGTCCGGCGTCAAATTATGATGAAAcaagaggagaaagagaagcaGAGGAGAACTCTCCCGTAAAACAAGTGGCTCTGACAGTGCCCACCACAGACGACCCTACTCTGCCGGTTCTGACATTCAGAATGTGGGTTCTAGGCACAATCTCGTGCGTTCTCCTATCATTTCTGAATCAGTTCTTCTGGTATCGCACGGAGCCTCTGACCATCACAGCCATCTCGGCTCAAATCGCGGTGCTACCAATCGGTCAACTCATGGCTTCCAAAATCACCGATCGAGTTTTCTTCAGAGGCACGCCGTGGGAATTCAACTTGAACCCGGGAGCCTTCAACGTGAAAGAGCACGTGCTCATCACTATCTTTGCTAACTCTGGTGCTGGCACCGTGTATGCGATTCACGTCGTTACCGCAGTGAAGGTGTTTTACAAGAGGCatatctctctctttgtttcttttcttctcgtAATCACCACTCAGGTATTAGGATTCGGATGGGCTGGTATATTCAGAAACTACCTCGTCGACCCTGCCTCAATGTGGTGGCCTGCAAATTTAGTTCAAGTTTCACTCTTcagAGCCCTGCACGAGAAGGAAAAGCGGCCCAAGGGCGGGTTAACGCGGTCTCAGTTCTTTGTGATCGCCTTCCTGTGCAGCTTCGCCTACTACGTATTTCCCGGTTACCTCTTTGAAATGTTAACTAGTCTCTCGTGGATATGCTGGATATTTCCCAATTCAGTCCTTGCACAGCAGCTCGGGTCGGGGCTTTATGGGCTCGGGATAGGCAGCTTGGGCCTGGACTGGTCCACCATCTCAGCGTACCTCGGAAGCCCACTTGCGAGTCCGTGGTTTGCGACTGCCAACGTAGCTGTGGGGTTCTTGTTAGTAATGTACGTTTTGACTCCCTTGTGCTATTGGCTGAATGTGTACAAGGCCAAGACCTTCCCCATATTTTCAGATGATCTATTCACCTCAAACGGTCGCGTTTACAATATCACAAGCATAATAGACTCCGATTTTCACTTGGACGTCGCCGCCTACGAGAGAGAAGGGCGCCTCTACCTCAGCACTTTCTTTGCCATGACTTATGGTGTTGGCTTTGCGGCGCTTACAGCTACCATTGTACACGTGGCTCTATTTCACGGAAGAGAAATATGGGAGGAAAGCAAGTCTAGCTTTAAGGAAAAGACTAATGCTAGCATGGATATACACAGCAGGATGATGAGGCGGTACAAGCAAGTCCCGGAATGGTGGTTCCTGTGCATCCTAATAGCCACCATTTGTGGGACCATATTTACGTGCGAGTATTACAACGAGCAGCTCCAGCTGCCTTGGTGGGGCGTTTTACTAGCATCCGCCATCGCCTTTATCTTCACTCTCCCAATCGGGATAATAACTGCAATCACAAACCAGACGCCCGGCTTGAACATTATCACCGAGTACATAATTGGCTACATCTACCCTGGATATCCTGTTGCTAACATGTGCTTCAAGGTTTACGGTTACATTAGTATGACGCAGGCCCTTACCTTCTTGCAAGACTTGAAGCTCGGCCACTACATGAAAATCCCTCCCAGAACCATGTTCCTGGCCCAGCTCGTCGGAACCCTCATCTCGGCCATTGTCTACCTGGCGACTGCATGGTGGCTGATGGAAACCATCCCAGATATTTGTACCGACGCATCCTCTGTCTGGACTTGTCCCAGCGACACCGTCTTCTATGATGCTTCCGTGATTTGGGGTCTTATTGGGCCTCGCAGAATCTTTGGCGATGAAGGAAACTACGAAGCAATCAATTGGTTCTTCCTGGGCGGAGCAATTGCTCCTGTGCTGGTGTGGTTGGGTGGCAGAGCATTCCCGCAACAAGAATGGATTAGGCTAATCAACATGCCGGTGTTGATTGGTGCAACGGGAATGATGCCTCCGGCAACTGCTGTCAACTTCACAACATGGATCGTTGTTGGTTTCCTCTCTGGATTTGTTCTGTACAGGTACAAGCAAGAATGGTGGAAGCGTCACAATTATCTTCTCTCGGGGGCCCTGGATGCTGGTCTTGCCTTTATGGGAGTTCTTTTGTATCTTTGCTTGGGTTTGGAAGACATCAGCCTCGATTGGTGGGGAAATAACCTCGATGGCTGTCCCTTAGCCAAATGCCCAACTGCCAAAGGGGTTTTAATCAAGGATTGTCCCCTTTTCACcta 2264 0.4823 MDDDEIRSPLIVPKKEEDEEEDRPASNYDETRGEREAEENSPVKQVALTVPTTDDPTLPVLTFRMWVLGTISCVLLSFLNQFFWYRTEPLTITAISAQIAVLPIGQLMASKITDRVFFRGTPWEFNLNPGAFNVKEHVLITIFANSGAGTVYAIHVVTAVKVFYKRHISLFVSFLLVITTQVLGFGWAGIFRNYLVDPASMWWPANLVQVSLFRALHEKEKRPKGGLTRSQFFVIAFLCSFAYYVFPGYLFEMLTSLSWICWIFPNSVLAQQLGSGLYGLGIGSLGLDWSTISAYLGSPLASPWFATANVAVGFLLVMYVLTPLCYWLNVYKAKTFPIFSDDLFTSNGRVYNITSIIDSDFHLDVAAYEREGRLYLSTFFAMTYGVGFAALTATIVHVALFHGREIWEESKSSFKEKTNASMDIHSRMMRRYKQVPEWWFLCILIATICGTIFTCEYYNEQLQLPWWGVLLASAIAFIFTLPIGIITAITNQTPGLNIITEYIIGYIYPGYPVANMCFKVYGYISMTQALTFLQDLKLGHYMKIPPRTMFLAQLVGTLISAIVYLATAWWLMETIPDICTDASSVWTCPSDTVFYDASVIWGLIGPRRIFGDEGNYEAINWFFLGGAIAPVLVWLGGRAFPQQEWIRLINMPVLIGATGMMPPATAVNFTTWIVVGFLSGFVLYRYKQEWWKRHNYLLSGALDAGLAFMGVLLYLCLGLEDISLDWWGNNLDGCPLAKCPTAKGVLIKDCPLFT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02257 754 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 38 722 IPR004648 GO:0055085
Bva11g02257 754 MobiDBLite consensus disorder prediction 1 41 - -
Bva11g02257 754 Pfam OPT oligopeptide transporter protein 61 716 IPR004813 GO:0035673
Bva11g02257 754 PANTHER ISP4 LIKE PROTEIN 23 753 IPR004648 GO:0055085
Bva11g02257 754 PANTHER OLIGOPEPTIDE TRANSPORTER 7-LIKE 23 753 - -
Bva11g02257 754 MobiDBLite consensus disorder prediction 1 45 - -
Bva11g02257 754 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 46 719 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02257 Bva-Chr11 18179884 18182675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02257 36 753 Organic Solute Cotransporters AT4G27730 63.586 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02257 - - qsu:111992353 1277.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02257 11 18179884 18182675 Bva11g02257 11 18179884 18182675 ECH