Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02255 ATGGTTGATGTAGCCGATAAATTAGCGTGTTTCCAAGCGATCACAGGTTTAGAAGATCCTGACTTGTGCACTGAAATTCTAGCTGCCCATGACTGGGACCTGGAACTCGCGATCTCCTCCTTCACCTCCGGTAACGCCAACCATCCAGAATCAGACACTTCCTCTGTCGGAGCTACTACATCTAACATTCACGCAACCGCTGTCGGTGACCCTTCCAACGTGGAATCTCTTCATGCCTTGCGACGATCAGACCCGGCCGCTCCTGGTTTGGCTTGGAAGCTCATTACCTTACCCGTTTCTGTGATTTCTGGTAGTTTAGGGTTAATTTCTGGCGCGATTGGCTTGGGGTTATGGGCCGCTGGCGGTGTGCTTTCATACTCTCTCGGACTCGTAGGCTTGGGCTCCGCTTCCACTTCCAGTCGGATCGGTGAATCCTCCGCTCCTTTGGTTTCCGTGTCGGCAGCGGCATCTGAGGCTATGAATTTTGTGGCAGCCTTTGACAGGGAATATGGCACCAGTAGGCCCAATTTTGTCAGCGAGGGTTTTATGGACGCGCTGCAAAGGTCAAGGAACGCCTTTAAGCTTTTATTTGTGTATTTGCATTCGCCCGAGCATCCGGATACACCTTTGTTTTGTGAGAGGACACTATGCTCTGATACCTTGGTGGCCTTTGTCAATGAGAATTTCGTATCTTGGGGAGGCAGTATTCGGGCTAGTGAAGGGTTTAAGATGAGTAATAGCTTGAAGGCTTCTCGATTTCCATTTTGTGCTGTAGTCATGCCTGCAACAAATCAGAGAATTGCACTGCTTCAACAGGTTGAAGGTCCAAAATCCCCCGAGGAGATGCTTATGATACTACAGAGAGTGCTTGAAGAAAGTTCTGCAGTTCTTGTTTCTGCACGGGTTGATgcagaagaaagacaaaataatatgcGCTTAAGGGAGGAGCAGGACGCTGCTTACAGAGCTGCACTTGAAGCTGATCAAGCTAGGGAACGGCAGAGgagagaagaacaagaacgTCTTGTAAGGGAAGCTGCTGAAGCTGAGAGGAAGCGTAAGGAGGAAGAGGAGGCTCGCGAAAGAGCTTTTCGTGAAGCTGCAGAGAAACAAGCCATGTTAGCTAAAATGCGTCAGGAAAAAGCCCAGTCACTTGGTGATGAACCAGAAAAAGGACCTAATGTTACACAGGTCCTAGTTCGGTTTCCAAATGGCGAAcgcaaggaaaggagattccAGAATACAGTGACTATCCAATCGCTATATGACTACGTTGACTCATTGGGTTGTTTAGAAACTGAGAGTTACAGCCTTGTCTCCAACTTTCCTCGGGTTGTTTATGGACAAGAGAAGCTCACATTATCACTGAAGGAAGCAGGATTGCATCCGCAGGCAAGCCTGTTTGTAGAGATCAATTCATA 1421 0.4638 MVDVADKLACFQAITGLEDPDLCTEILAAHDWDLELAISSFTSGNANHPESDTSSVGATTSNIHATAVGDPSNVESLHALRRSDPAAPGLAWKLITLPVSVISGSLGLISGAIGLGLWAAGGVLSYSLGLVGLGSASTSSRIGESSAPLVSVSAAASEAMNFVAAFDREYGTSRPNFVSEGFMDALQRSRNAFKLLFVYLHSPEHPDTPLFCERTLCSDTLVAFVNENFVSWGGSIRASEGFKMSNSLKASRFPFCAVVMPATNQRIALLQQVEGPKSPEEMLMILQRVLEESSAVLVSARVDAEERQNNMRLREEQDAAYRAALEADQARERQRREEQERLVREAAEAERKRKEEEEARERAFREAAEKQAMLAKMRQEKAQSLGDEPEKGPNVTQVLVRFPNGERKERRFQNTVTIQSLYDYVDSLGCLETESYSLVSNFPRVVYGQEKLTLSLKEAGLHPQASLFVEINS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02255 473 ProSiteProfiles UBX domain profile. 391 469 IPR001012 GO:0005515
Bva11g02255 473 SUPERFAMILY Thioredoxin-like 156 300 IPR036249 -
Bva11g02255 473 SUPERFAMILY Ubiquitin-like 354 470 IPR029071 -
Bva11g02255 473 SMART ubx_3 389 471 IPR001012 GO:0005515
Bva11g02255 473 PANTHER FAS-ASSOCIATED PROTEIN 1 473 - -
Bva11g02255 473 Pfam UBX domain 391 470 IPR001012 GO:0005515
Bva11g02255 473 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 10-LIKE 1 473 - -
Bva11g02255 473 Pfam UBA-like domain 6 42 - -
Bva11g02255 473 CDD UAS 177 292 - -
Bva11g02255 473 Gene3D Glutaredoxin 146 301 - -
Bva11g02255 473 Gene3D - 394 472 - -
Bva11g02255 473 Coils Coil 322 380 - -
Bva11g02255 473 CDD UBA_FAF 11 42 - -
Bva11g02255 473 CDD UBX 398 470 - -
Bva11g02255 473 SMART 45neu3 161 287 IPR006577 -
Bva11g02255 473 Gene3D - 2 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02255 Bva-Chr11 18166111 18170419 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02255 K18726 - twl:120016733 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02255 11 18166111 18170419 Bva11g02255 11 18166111 18170419 ECH