Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02247 atgagtgAGGTGGCGAGCTCAGTGGTGCACGAGGTGTTGGGACGAAGAGTTGAGGATGTGGATCAACCgattattgattatattatcaaCGTCCTCGCCGACgaggattttgattttggaacCGATGGAGAAGGCGCTTTCGAATCTCTCGGTGAGCTCCTTGTCGGCGCTGGCTGCGTCAATGACTACTCTGAGTGTCGCTCAGTTTGTAGCATATTATCTGAGAAATTTGGAAAGCATGGTTTGGTCAAGGCTAAACCAACAGTGAGAAGCCTTGCAGCACCCTTCAGAATGAATGAGGGAATGGATGATGAAGAGACTCCTAAGAAGAAGCCCGAGGCTATAGATGGTCCCATGCTATCCGAACGTGACCGAGCAAAgctagaaagaagaaagaggaaggaGGAACGCCAAAGAGAGGCACAATACCAAATGCATTTAGAGGAAATGGAAGCAGTCCGAGCAGGGATGCCTATTGCGTGTGTTAGGCATGATGGTAGTGGTGGACCAGCTGTCAAGGATATTCACATGGAGAACTTCAATATTTCTGTTGGTGGCCGTGATCTCATTGTGGATGGTTCTGTCACACTTTCATATGGAAGGCATTATGGCCTTGTTGGAAGAAATGGTACAGGGAAAACAACTTTCCTCAGGCACATGGCCTTGCATGCCATTGATGGTATTCCGAATAATTGCCAGATATTGCATGTGGAACAAGAGGTGGTTGGTGATGATACAACGGCCTTGCAGTGTGTCCTTAATTCTGATACTGAGAGAACCCAGCTTCTAGAGGAAGAGGCTCGTTTACTTGCCCAGCAGAGAGAGTTGGAGAGAGATGATACAACTGGAAAGAGCAAGGGAAATCTGAATAGTGCAGTTGACAAAGATGCTATTTCACAAAGGCTTGAGGAAATATACAAGAGGCTTGAGTTAATTGATGCTGATTCTGCAGAATCACGAGCGGCATCAATACTTGCGGGCCTAAGTTTCTCCCCTGAGATGCAGAAGAAGGcaacaaaaacattttctggAGGATGGCGGATGCGGATAGCTCTTGCTCGTGCACTATTTATAGAGCCTGATATGTTGCTTCTTGATGAACCTACGAATCATCTTGATCTTCATGCTGTCCTGTGGCTGGAATCTTACTTGGTTAAATGGCCAAAAACATTGATCGTTGTCTCTCATGCTAGAGAATTTTTGAACACGGTGGTTACTGATATTATTCACCTACATCATCAAAAGCTGATTACTTATAAAGGAAATTATGATACATTTGAGAGGACTCGAGAAGAACAGATTAAAAACCAGCAAAAAGCATTGGAGGCACATGACCGTGCAAGAGCTCATATGCAGTCTTTCATTGACAAATTTCGCTATAATGCCAAGAGGGCATCGCTTGTTCAATCAAGAATCAAGGCTTTGGAGCGGATGGGTCATGTAGATGAAATCGTTAATGATCCTGACTACAAGTTTGAGTTCCCAACTCCAGATGATAGACCAGGACCACCTATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCGATTCtatttaagaatttgaattttgggaTTGATCTGGACAGCCGAATTGCAATGGTTGGACCTAATGGTATAGGCAAATCAACTATACTTAAGATAATTGCTGGGGAACTACAACCAAGTTCTGGGACAGTTTTCCGTTCTGCTAAGGTTCGTATAGCAGTTTTTAATCAGCACCATGTTGATGGACTGGACTTATCTTCTAATCCTCTTCTGTATATGATGCGCTGCTACCCTGGAGTTCCCGAACAGAAGCTTCGTGCTCACTTGGGTTCTTTTGGTGTAACTGGAAATCTTGCACTTCAGCCAATGTATACATTGTCAGGTGGTCAGAAAAGCAGGGTAGCATTTGCAAAGATAACTTTCAAGAAACcacatataattttacttgatgAACCATCCAACCATCTGGACTTAGATGCTGTTGAAGCACTAATTCAAGGTCTGGTAATTTTCCAAGGAGGCATTCTCATGGTGAGTCACGACGAGCACCTCATATCTGGGAGTGTGGAGGAGCTATGGGTTGTATCCCAAGGGACAGTGGCGCCATTCCATGGCACCTTCCaagattataagaaaatactCCAGTCATCTTG 2150 0.4209 MSEVASSVVHEVLGRRVEDVDQPIIDYIINVLADEDFDFGTDGEGAFESLGELLVGAGCVNDYSECRSVCSILSEKFGKHGLVKAKPTVRSLAAPFRMNEGMDDEETPKKKPEAIDGPMLSERDRAKLERRKRKEERQREAQYQMHLEEMEAVRAGMPIACVRHDGSGGPAVKDIHMENFNISVGGRDLIVDGSVTLSYGRHYGLVGRNGTGKTTFLRHMALHAIDGIPNNCQILHVEQEVVGDDTTALQCVLNSDTERTQLLEEEARLLAQQRELERDDTTGKSKGNLNSAVDKDAISQRLEEIYKRLELIDADSAESRAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTLIVVSHAREFLNTVVTDIIHLHHQKLITYKGNYDTFERTREEQIKNQQKALEAHDRARAHMQSFIDKFRYNAKRASLVQSRIKALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKIIAGELQPSSGTVFRSAKVRIAVFNQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVIFQGGILMVSHDEHLISGSVEELWVVSQGTVAPFHGTFQDYKKILQSS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02247 716 SMART AAA_5 199 416 IPR003593 -
Bva11g02247 716 SMART AAA_5 531 698 IPR003593 -
Bva11g02247 716 Pfam ABC transporter 409 489 IPR032781 -
Bva11g02247 716 Coils Coil 259 279 - -
Bva11g02247 716 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 121 715 - -
Bva11g02247 716 PANTHER NON-TRANSPORTER ABC PROTEIN 121 715 - -
Bva11g02247 716 MobiDBLite consensus disorder prediction 98 138 - -
Bva11g02247 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 506 715 IPR003439 GO:0005524
Bva11g02247 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Bva11g02247 716 ProSitePatterns ABC transporters family signature. 342 356 IPR017871 GO:0005524
Bva11g02247 716 Gene3D - 468 716 IPR027417 -
Bva11g02247 716 Gene3D - 125 450 IPR027417 -
Bva11g02247 716 CDD ABCF_EF-3 175 415 - -
Bva11g02247 716 MobiDBLite consensus disorder prediction 99 138 - -
Bva11g02247 716 Pfam ABC transporter 523 653 IPR003439 GO:0005524
Bva11g02247 716 ProSitePatterns ABC transporters family signature. 625 639 IPR017871 GO:0005524
Bva11g02247 716 CDD ABCF_EF-3 506 698 - -
Bva11g02247 716 Pfam ABC transporter 194 370 IPR003439 GO:0005524
Bva11g02247 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 708 IPR027417 -
Bva11g02247 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 438 IPR003439 GO:0005524
Bva11g02247 716 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02247 Bva-Chr11 18126268 18134066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02247 462 667 Calmodulin-binding Proteins AT2G36910 25.926 6.13e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02247 K06158 - jre:109002067 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02247 11 18126268 18134066 Bva11g02247 11 18126268 18134066 ECH