Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02246 ATGTCTGGTTCGTGGGCACGCGGGTCTCTGATCGTTCTTGCCATCATCTCCTTTGGATGTCTATTCGCAATTTCCATTGCAAAAGAGGAGGCGACCAAGTTGGGGACAGTCATCGGGATAGATCTGGGAACAACTTATTCCTGTGTTGGTGTTTACAAGAACGGCCATGTTGAAATAATAGCAAATGATCAAGGTAACCGTATCACCCCATCATGGGTTGCATTCACGGACAGTGAGAGACTCATTGGGGAGGCTGCAAAGAATCTGGCAGCCGTCAACCCTGAAAGGACCATATTTGATGTCAAGAGGCTCATCGGAAGAAAGTTTGAAGATAAAGAAGTTCAGAGAGACATGAAGCTTGTTCCTTATAAGATTGTGAACAAGGATGGAAAACCTTACATACAGGTTAAAATTAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAAATCAGTGCTATGATTCTGACGAAGATGAAGGAAACTGCAGAAGCATTCCTTGGGAAGAAAATTAAGGATGCTGTGGTCACTGTCCCTGCTTATTTCAACGATGCCCAGAGGCAGGCTACCAAGGATGCTGGTGTCATTGCTGGATTGAATGTTGCAAGAATTATTAATGAGCCCACTGCCGCTGCCATTGCGTATGGATTGGACAAGAAAGGAGGCGAGAAGAACATTCTTGTCTTTGATCTTGGGGGTGGGACTTTTGATGTCAGTATATTGACAATTGATAATGGTGTTTTCGAGGTTCTTGCTACAAATGGAGATACTCATCTTGGAGGTGAGGATTTTGATCAGAGGATAATGGAGTACTTCATCAAATTGATCAAGAAAAAGCATGGAAAAGATATTAGCAAGGACAAGAGAGCGCTTGGAAAGCTAAGGAGAGAAGCCGAGCGTGCAAAGAGAGCTCTTAGTAGCCAACATCAAGTCCGCGTGGAAATTGAATCACTCTTCGATGGTATTGACTTTTCTGAGCCACTTACTCGAGCTCGATTTGAGGAGTTGAACAACGACTTGTTCCGGAAGACAATGGGGCCAGTGAAAAAAGCAATGGAAGATGCTGGACTGGAGAAGCGCCAGATTGATGAGATCGTACTTGTTGGTGGAAGCACCAGAATTCCAAAGGTACAACAACTTTTGAAGGACTACTTCGATGGTAAGGAGCCAAATAAGGGTGTGAACCCCGATGAGGCAGTTGCCTATGGTGCTGCGGTGCAAGGAAGCATCTTGAGTGGAGAGGGCGGTGAGGAAACCAAAGATATCCTTCTCCTGGATGTTGCTCCACTTACCCTTGGAATTGAGACTGTTGGCGGAGTAATGACAAAGTTGATTCCTAGGAATACTGTTATCCCGACCAAGAAATCTCAAGTGTTTACCACCTACCAGGATCAGCAGACTACAGTCTCCATTCAGGTGTTTGAAGGTGAGAGGAGTCTCACAAAGGATTGTCGACTACTTGGGAAATTTGATCTGTCTGGAATTCCTCCAGCTCCAAGAGGGACCCCTCAAATTGAAGTGACCTTCGAAGTGGATGCAAATGGAATCCTAAATGTAAGGGCAGAAGACAAGGGCACCGGTAAATCAGAGAAGATTACCATCACGAATGAAAAGGGGCGGCTGAGCCAGGAGGAAATTGACAGGATGGTTCGTGAGGCAGAAGAGTTTGCAGAGGAAGACAAAAAGGTTAAAGAGAGGATTGACGCTCGTAACAGCCTTGAAACCTACGTCTATAACATGAAAAACCAGATAAGTGATAAGGACAAGCTGGCCGACAAGTTAGAGTCTGACgagaaggagaaaattgaGAGCGCTGTGAAAGAGGCTTTGGAATGGTTGGATGACAACCAGAGTGCTGAGAAAGAAGACTACGAAGAGAAGCTCAAAGAGGTGGAAGCGGTTTGTAATCCAATTATCAGCGCTGTTTATCAGAGGACGGGTGGCGCATCGGGCGGTGGATCAGGAGAAGCAGAAGACGATGATTCTCACGATGAGCTCTA 2000 0.454 MSGSWARGSLIVLAIISFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNLAAVNPERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDKRALGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKRQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGEETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVRAEDKGTGKSEKITITNEKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQISDKDKLADKLESDEKEKIESAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIISAVYQRTGGASGGGSGEAEDDDSHDEL 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02246 666 Coils Coil 580 600 - -
Bva11g02246 666 CDD HSPA5-like_NBD 35 409 IPR042050 -
Bva11g02246 666 Pfam Hsp70 protein 37 644 IPR013126 GO:0005524|GO:0140662
Bva11g02246 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 574 IPR029047 -
Bva11g02246 666 Gene3D - 38 409 - -
Bva11g02246 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 228 241 IPR018181 -
Bva11g02246 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bva11g02246 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 568 650 IPR029048 -
Bva11g02246 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 415 556 IPR029047 -
Bva11g02246 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 234 244 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 421 440 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 502 518 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 64 76 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 86 94 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 362 378 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 174 194 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 394 414 - -
Bva11g02246 666 PRINTS 70kDa heat shock protein signature 36 49 - -
Bva11g02246 666 Coils Coil 546 566 - -
Bva11g02246 666 PANTHER HEAT SHOCK PROTEIN 70KDA 22 652 IPR013126 GO:0005524|GO:0140662
Bva11g02246 666 Gene3D - 220 394 - -
Bva11g02246 666 PANTHER LUMINAL-BINDING PROTEIN 22 652 - -
Bva11g02246 666 MobiDBLite consensus disorder prediction 644 666 - -
Bva11g02246 666 Gene3D Actin; Chain A, domain 4 260 343 - -
Bva11g02246 666 SUPERFAMILY Actin-like ATPase domain 35 219 IPR043129 -
Bva11g02246 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 40 47 IPR018181 -
Bva11g02246 666 Gene3D - 557 655 IPR029048 -
Bva11g02246 666 Coils Coil 602 634 - -
Bva11g02246 666 Coils Coil 284 304 - -
Bva11g02246 666 SUPERFAMILY Actin-like ATPase domain 222 413 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02246 Bva-Chr11 18121018 18125112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02246 1 646 Miscellaneous Gene Families AT5G28540 91.486 0.0 1215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02246 K09490 - gmx:547839 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02246 11 18121018 18125112 Bva11g02246 11 18121018 18125112 ECH