Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g02243 ATGCCTGGTTTAGTATCTGTGAAAACTCCGCCGGAAGCCCCGCCCCTCCGAATCTCGGTCCCCGAATCCCAAACCCCGCAGAGATCCGATTCCGGAAACCTAAAAACCCCGTCTCCACTTCCAAAGAAACAACCTTCTCCTTCGCCATCTCGTGCTAAACCTTCCCCGGATCGGAAAAAGAAGCCCCCTACCCCGGAGACGCCAAACCATGACCTTTCAGACGCCTCCCTCGACAACCCTGATCTCGGACCCTTCCTTCTCAAGCTCGCCCGAGATACCATTGCCTCTGGTGAAGGTCCAGCCAAAGCTCTAGACTATGCCATTCGGGCCTCCAAGTCCTTCGAGCGGTGTTCCCTCGATGGGGAGCCCAGCTTGGACCTCGCTATGAGTTTGCACGTCCTAGCTGCCATTTATTGTAGCTTAGCCAGGTTTGACGAGGCTGTCCCTGTCCTTGAGCGGGCGATCCAGGTTCCCGATGTAGCCAGGGGTCCCGATCACGCTCTTGCTGCCTTCTCTGGTTATATGCAATTAGGGGATACCTACTCCATGCTTGGTCAGGTCGATAAGTCCATCGCCTGCTATGACCAAGGGCTCAACATTCAGATCCAAGCCTTGGGTGATACAGATCCAAGAGTTGGAGAGACTTGCAGATACTTAGCTGAAGCCAATGTTCAAGCAATGCAATTTGATAAAGCAGATGAATTGTGCAAGAAAACACTTGAGATTCATGGTGCACATAGTGAACCTGCATCTCTAGAAGAGGCCGCAGATAGAAGGCTTATGGCACTTATATGTGAGGCAAAGGGAGATTTTGAATCAGCTCTTGAACATCTTGTCCTTGCCAGCATGGCGATGATTGCAAATGGACAAGACAATGAAGTTGCTGCTATTGATGTCAGTATTGGAAACATTTACATGTCTCTCTGTCGCTTTGATGAAGCAATCTTCTCTTACCAGAAGGCACTTACTGTTTTCAAATCATCAAAGGGTGAAAACCATCCTTCAGTTGCATCTGTTTTTGTGCGCCTTGCTGATTTGTATCACAGAACTGGAAAACTGAGAGAGTCCAAATCCTATTGCGAAAATGCTCTGAGAATATACTCAAAGCCAGTGCCAGGGACCACAGCAGAGGAGATTGCTGGTGGCTTGACAGAAGTTTCAGCTATTTTTGAATCTGTAGATGAGCCTGAGGAGGCACTGAAACTCTTGCAGAAGGCGATGAAATTGTTGGAGGATAAACCAGGACAGCAGAGCACAATTGCAGGAATGGAAGCACGAATGGGTGTGATGTTTTACATGATTGGCAGGTATGAAGAGGCAAGGAACTCTTTAGAGAGTGCAGTGGCAAAACTAAGGGCCAGTGGGGAGAGGAAGTCTGCCTTCTTTGGGGTTGTTCTGAACCAGATGGGATTGGCATGTGTACAGCTGTTCAAGATAGATGAGGCTGCTGAATTATTTGAAGAAGCCAGGGGAATTCTTGAACAGGAGTGTGGCCCATGCCATCAAGATACTCTCGGAGTATACAGCAATCTCGCAGCAACTTACGATGCGATGGGAAGAGTGGGAGATGCAATTGAGATCTTGGAGTATGTTCTTAAATTGAGGGAAGAAAAGCTTGGGATAGCAAATCCTGATTTTGAAGAGGAGAAGCGAAGGCTGGCTGAGCTGCTGAAAGAAGCAGGCAAGACACGAGACAGAAAAGCAAAATCTCTGGAAAACCTTATTGATCCCAGCTCAAAAAGGACAAAGAAGGAGGGGACAAAGAGGTGGCCCGGCttgggttttaaaattta 1793 0.4808 MPGLVSVKTPPEAPPLRISVPESQTPQRSDSGNLKTPSPLPKKQPSPSPSRAKPSPDRKKKPPTPETPNHDLSDASLDNPDLGPFLLKLARDTIASGEGPAKALDYAIRASKSFERCSLDGEPSLDLAMSLHVLAAIYCSLARFDEAVPVLERAIQVPDVARGPDHALAAFSGYMQLGDTYSMLGQVDKSIACYDQGLNIQIQALGDTDPRVGETCRYLAEANVQAMQFDKADELCKKTLEIHGAHSEPASLEEAADRRLMALICEAKGDFESALEHLVLASMAMIANGQDNEVAAIDVSIGNIYMSLCRFDEAIFSYQKALTVFKSSKGENHPSVASVFVRLADLYHRTGKLRESKSYCENALRIYSKPVPGTTAEEIAGGLTEVSAIFESVDEPEEALKLLQKAMKLLEDKPGQQSTIAGMEARMGVMFYMIGRYEEARNSLESAVAKLRASGERKSAFFGVVLNQMGLACVQLFKIDEAAELFEEARGILEQECGPCHQDTLGVYSNLAATYDAMGRVGDAIEILEYVLKLREEKLGIANPDFEEEKRRLAELLKEAGKTRDRKAKSLENLIDPSSKRTKKEGTKRWPGLGFKI 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g02243 597 PANTHER - 1 596 - -
Bva11g02243 597 Pfam MalT-like TPR region 133 279 IPR041617 -
Bva11g02243 597 MobiDBLite consensus disorder prediction 562 597 - -
Bva11g02243 597 MobiDBLite consensus disorder prediction 1 79 - -
Bva11g02243 597 SMART tpr_5 380 413 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 295 328 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 505 538 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 421 454 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 463 496 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 128 161 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 213 246 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 171 204 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 255 288 IPR019734 GO:0005515
Bva11g02243 597 SMART tpr_5 337 370 IPR019734 GO:0005515
Bva11g02243 597 MobiDBLite consensus disorder prediction 53 67 - -
Bva11g02243 597 Coils Coil 434 454 - -
Bva11g02243 597 SUPERFAMILY TPR-like 384 536 IPR011990 GO:0005515
Bva11g02243 597 MobiDBLite consensus disorder prediction 20 39 - -
Bva11g02243 597 Gene3D Tetratricopeptide repeat domain 76 279 IPR011990 GO:0005515
Bva11g02243 597 MobiDBLite consensus disorder prediction 562 591 - -
Bva11g02243 597 Coils Coil 546 566 - -
Bva11g02243 597 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 1 596 - -
Bva11g02243 597 Pfam Tetratricopeptide repeat 465 537 - -
Bva11g02243 597 Pfam Tetratricopeptide repeat 294 368 - -
Bva11g02243 597 Gene3D Tetratricopeptide repeat domain 280 463 IPR011990 GO:0005515
Bva11g02243 597 Gene3D Tetratricopeptide repeat domain 464 589 IPR011990 GO:0005515
Bva11g02243 597 ProSiteProfiles TPR repeat profile. 295 328 IPR019734 GO:0005515
Bva11g02243 597 SUPERFAMILY TPR-like 174 534 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g02243 Bva-Chr11 18107021 18110510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g02243 128 340 Glycosyltransferase AT3G04240 24.545 9.47e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g02243 - - mnt:21391217 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g02243 11 18107021 18110510 Bva11g02243 11 18107021 18110510 ECH